Pseudomonas avellanae: BKM03_20830
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Entry
BKM03_20830 CDS
T05369
Name
(GenBank) hybrid sensor histidine kinase/response regulator
KO
K20973
two-component system, sensor histidine kinase SagS [EC:
2.7.13.3
]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl02020
Two-component system
pavl02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BKM03_20830
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
BKM03_20830
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pavl01001
]
BKM03_20830
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pavl02022
]
BKM03_20830
Enzymes [BR:
pavl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
BKM03_20830
Protein kinases [BR:
pavl01001
]
Histidine kinases
Other
BKM03_20830
Two-component system [BR:
pavl02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
BKM03_20830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
HisKA
Jnk-SapK_ap_N
IFT57
DUF4164
Motif
Other DBs
NCBI-ProteinID:
AVB21391
UniProt:
A0A6H3CWE1
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All DBs
Position
4356848..4359199
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AA seq
783 aa
AA seq
DB search
MDISLKNRLSFKQARLAVLIGFALGTLLSVAQIAIDYASEDASINREIQSLLEIIQNPAS
RIAYNIDAELAQELTLGLLHSPAVVSARLTDNNDTVLASVERATATGRYRVLSDWLFGES
RQFQEKLHLDHVPDETIGTLYLTVDTFAFGSHFLQRAEITLLNGFVRSLALAGILTILFY
ATLTKPLVRVIRDLSSRDPRTVDQAKITCPPYHEQDEIGVLVATFNRQFETMSSEFSRRR
AAEDRLTDHLNELENIVSARTNELKASNMRLRESNEELQIARSTALDMANARSAFLAHMS
HEIRTPLNGLLGMLALSLDSPLGAEQRQQLMIAHDSGKVLVELLNDILDMSKFDAGHLEI
ERIPFDLGGLIEDTANLLSQNAAPSVELTCLIAPDFPAMVTGDPTRVRQIVSNLLSNALK
FTRFGRVDVRLTHHQDAASREHRVRIEVRDTGIGIAQDAQAKIFQPFTQAETAITRQYGG
TGLGLALTNNLCEAMHGTLSIQSQSGFGSQFCAELPLPVHVPAVAQNPLRGRVTVVSSAG
SGLVELLGSLLPFWGVDLKRRSIDDSPDDLDLDNAPDLVITDCPECLFAIRPTTPVPILL
VTAYGNFMPGEQVAALAPLQQQARPLARNALYHALRRVLNQEDTGNRDTLALDQPTQRVA
RVLLVEDNPVNQLVAKGILSKLGCEVIISSHGGEALEQLEHGHFDLVLMDCNMPVMDGYE
ASRQIRSSGRWPNLPIVALTANAMPDERERCKAAGMNDYLAKPFRLTELAGILDQWIPVT
DDR
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggatatatcgctcaaaaacaggctttcgttcaagcaggcacgccttgccgtactgatc
ggctttgcgcttggcaccctgttgagcgtggcgcagattgcgatcgattatgccagcgaa
gacgcctccatcaatcgcgaaatccaatcactgctggaaatcatccagaacccggcttcg
cgcatcgcctacaacatcgacgccgaactcgcccaggaactcacgctcgggttgttgcac
tcccctgctgtggtcagtgccagactgaccgataacaacgacacggtgctcgccagcgtc
gaacgagcgactgccaccgggcgttaccgggtgctcagtgactggctgttcggcgaaagc
cggcagtttcaggagaagctgcacctcgaccatgtgccagacgaaaccatcggcacactg
tacctgaccgtagacaccttcgcgttcggcagccactttctgcaacgcgccgagatcacc
ctgctcaatggttttgtccgcagcctggcgctggccggcattctgaccattctgttctat
gcgaccctgaccaagccgctggtgagggtcatccgcgacttgagcagccgcgacccacgc
actgtcgatcaggcgaaaatcacctgcccgccgtatcacgagcaggacgaaatcggcgtg
ctggtcgcgacgttcaatcgccagttcgaaaccatgagtagcgaattttccaggcgccgc
gccgccgaggatcggctgaccgaccatctgaacgagctggaaaacattgtttcggcacgt
accaacgagctcaaggccagcaacatgcgcctgcgcgagtccaacgaagaattgcagatc
gcgcgcagcacggcattggacatggccaacgcacgctcggcgtttctggcgcatatgagt
catgaaatccgcacgccactcaacggtttgctgggcatgctggcgctgtcgctggacagc
ccgctcggtgccgagcaacgccagcaactgatgatcgcccacgactcgggcaaggtgctg
gtcgaactgctcaacgatattctcgacatgtccaagttcgatgccggccatctggagatc
gagcgcattccgttcgaccttggggggctgatcgaggacaccgccaatctgctctcgcag
aatgcagcgcccagcgtggaactgacctgcctgattgcgccggattttccggcaatggtc
accggcgacccgaccagggtccggcagatcgtcagcaacctgctgtccaacgcgctcaag
ttcacccgtttcgggcgtgtcgatgtacgcctgacccaccatcaggatgcggccagcagg
gaacatcgtgtacgcatcgaggtgcgcgacaccggtatcggcatcgcgcaggatgctcag
gcaaaaatattccagccgttcacccaggccgaaaccgcaatcacccgccagtacggcggc
accgggctgggcctggcgctgaccaacaacctttgcgaggccatgcacggcacattgagc
atccagtcgcaatcaggcttcggcagtcagttctgcgccgaactgccactaccggtgcac
gtgcctgcggttgcgcagaacccgctcagaggccgggtaaccgtggtcagctcggccggc
agcggtcttgtggagctgctcggcagcctgctgcccttctggggagtggacctcaagcgg
cgcagcatcgacgacagcccggacgatctggacctcgacaacgctccagacctggtcatc
accgactgccccgagtgcctgttcgcgattcgcccgaccacgccggtgccgattctactg
gtcacggcttacggcaacttcatgccgggcgaacaggttgcggcgctggcgccattgcaa
cagcaggcccgcccactggcccgcaacgcgctttaccacgcactgcgacgcgtccttaat
caggaagacaccggcaaccgggacacgctggcgctcgatcagccgactcagcgcgtggcc
cgcgtcctgctcgtggaagacaacccggtcaatcaactggtagccaaaggcatactgagc
aagctcggctgcgaagtgattatcagcagtcacggtggggaggcgctggaacagctggag
cacggccatttcgatctggtgctgatggactgcaacatgccggtcatggatggctatgaa
gccagccgccagatccgcagcagcggccgctggccaaacctgccgatcgtcgcgctgacc
gccaacgccatgcccgacgagcgtgagcgctgcaaggcggcaggcatgaacgactatctg
gccaagccgttccgactcactgaactggccggcattctggatcagtggatccccgtcact
gacgaccgctga
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