KEGG   Pseudomonas avellanae: BKM03_30340
Entry
BKM03_30340       CDS       T05369                                 
Name
(GenBank) type VI secretion system tube protein Hcp
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pavl  Pseudomonas avellanae
Pathway
pavl02025  Biofilm formation - Pseudomonas aeruginosa
pavl03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pavl00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BKM03_30340
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    BKM03_30340
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pavl02044]
    BKM03_30340
Secretion system [BR:pavl02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BKM03_30340
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: AVB23370
UniProt: A0A6H3CL88
LinkDB
Position
p1_tig4:74051..74551
AA seq 166 aa
MAFDSYLKIEGIPGEALDAQFKDWIEMEDFDVGASQSASATATSAGGATGGRARMSDLFF
RKTVDKSTPKLHEACCSGKHFNEVTIAVNRAGAEKFKYLEIKLEEVIISSVSLNGNGNVE
GGFPTETVRLNYGRMKMTYAQQKRADGQGGGQVVGGWDGIANKIYA
NT seq 501 nt   +upstreamnt  +downstreamnt
atggcttttgattcatacttaaaaatagaaggcattcccggcgaagcacttgacgcccag
ttcaaggactggatcgaaatggaagatttcgacgtgggtgcaagccaatctgcgtcagcc
actgccaccagcgctggcggggccacaggtgggcgcgctcgtatgagcgatctgtttttt
cgtaagaccgtagacaagtcaacgcctaaacttcacgaggcttgttgcagtgggaaacac
ttcaacgaggtcacgatcgcagttaatcgcgccggggcagaaaagttcaagtacttggaa
attaaactagaagaagtaattatttcttccgtatcacttaacgggaacggtaacgttgaa
ggcggctttcctacggagacggtgcgcctaaattatggccgtatgaagatgacatacgcg
caacaaaagcgtgccgatggtcagggcggtggtcaggttgttggtggttgggacggtatc
gctaataaaatatatgcctaa

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