KEGG   Photorhabdus asymbiotica: PAU_03970
Entry
PAU_03970         CDS       T00941                                 
Symbol
hsdR
Name
(GenBank) type i site-specific deoxyribonuclease hsdr
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pay  Photorhabdus asymbiotica
Brite
KEGG Orthology (KO) [BR:pay00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pay02048]
    PAU_03970 (hsdR)
Enzymes [BR:pay01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     PAU_03970 (hsdR)
Prokaryotic defense system [BR:pay02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   PAU_03970 (hsdR)
SSDB
Motif
Pfam: EcoR124_C SWI2_SNF2 HSDR_N ResIII DEAD HSDR_N_2
Other DBs
NCBI-ProteinID: CAQ86058
UniProt: C7BP32
LinkDB
Position
4625019..4628138
AA seq 1039 aa
MVDCTKSIAESNNFIILDKYNPEWKITESYQSEGDLERELIQDLVNQGYEYLPALNNTKA
MLANIREQLQILNNVEFLEAEWRRFVETWMDKPSDGVVEKTRKIHDDYVHDFVFDDGRIQ
NIYLLDRKNILRNKVQVIKQFEQSGTHANRYDVTILVNGLPLVQIELKKRGVAIREAFNQ
IHRYSKESFNSDNSLFKYLQLFVISNGTDTRYFANTTKRDKNSFDFSMNWAKSDNTLIKD
LKDFTATFFQKHTLLNVLFNYSVFDSSQTLLVMRPYQIAATERILWKINSSFTAKNWSKP
ESGGFIWHTTGSGKTLTSFKAARLATELDFIDKVFFVVDRKDLDYQTIKEYQRFSPDSVN
GSDNTAGLKRNLDKDDNKIIVTTIQKLNNLMKAEADLPVYQQQVVFIFDECHRSQFGEAQ
KNLKKKFKRFYQFGFTGTPIFPQNALGSETTASVFGRELHSYVITDAIRDEKVLKFKVDY
NDVRPQFKALETETDEKKLSAAENRQAFLHPLRIQEITQYILNNFRQKTHRTFPSARGFN
AMLAVSSVDAAKAYYATFKELQEEAANKSASYKPLRVATIFSFAANEEQSAIGDITDESF
DTSAMNSSAKEFLDAAIDDYNAHFKTNFSTDSNGFQNYYRDLALRVKNQDIDLLIVVGMF
LTGFDAPTLNTLFVDKNLRYHGLMQAFSRTNRIFDATKTFGNIVTFRDLERATIDAITLF
GDKNTKNVVLEKSYKEYMEGFTDIVTGEAKRGFMDIVTTLEYQFPDPASIDSEKGKKAFV
KLFGEYLRAENILQNYDEFAMLKDLQKVDSSDPDAVETFKSAHYLDDEKFAELQTIRLPS
ERKIQDYRSAYNDIRDWQRREKVANDKDKSTTDWDDVVFEIDLLKSQEINLDYILGLIFE
HNRQKKGKEALTEEVRRLIRSSLGNRAKEGLIVDFIQQTNLDDMPDKASIIDAFFIFAQR
EQLREIEALIKEENLNEEAAKRYIRTSLKREYATENGTELNETLPKLSPLNPQYKTKKQT
VFQKIGEFIEKFKGVGGQI
NT seq 3120 nt   +upstreamnt  +downstreamnt
atggttgattgcaccaagtcaattgctgagtccaataatttcattattttggataaatac
aacccagaatggaaaatcaccgagagctaccaaagcgaaggtgatctggagcgtgagctg
attcaggatttggttaaccaaggctatgaatacctgccagccttgaacaataccaaggct
atgctggctaatatcagggaacagctgcaaatccttaacaatgtagagttcctggaggct
gaatggcgtcgctttgtggaaacctggatggacaagcccagcgatggcgttgtcgaaaag
acccgtaagattcatgatgactatgttcatgatttcgtcttcgacgatggccgtattcag
aacatctatctactggatagaaaaaacatccttcgcaataaagtgcaggtgatcaagcag
tttgagcaaagtggcacgcacgccaatcgctacgatgtaaccatcctggtcaatggcctg
ccgctggtacaaatcgaactgaaaaagcgtggcgtggcaattcgtgaagcctttaaccag
atacaccgttacagcaaggaaagctttaacagtgacaattccctgtttaaatacctgcaa
ttgtttgtcatttccaacggtacagatacccgttactttgccaacaccaccaagcgggat
aagaacagctttgatttctccatgaactgggcgaagtccgataacacgctgattaaagac
ttgaaggactttaccgccacgtttttccagaagcatactctgctcaatgtgctgtttaat
tacagcgtgtttgacagtagccagacgctgctagtgatgcgcccctatcagattgctgcc
accgagcgaatcctatggaaaattaacagttcctttaccgccaagaactggtcaaagccg
gaaagcggggggtttatctggcacaccaccggatcaggcaaaaccctgaccagctttaag
gccgcacggctggcaactgaactagactttattgataaagttttctttgtggtagacagg
aaagatctcgattaccagaccataaaggagtaccagcgcttctccccggacagcgtcaat
ggttctgacaatactgcaggccttaaacggaatctggataaagacgataacaaaattatc
gtcaccacaattcagaaattgaataacctgatgaaagctgaagctgacctacccgtctat
cagcaacaggtggtgtttatttttgatgaatgtcaccgtagtcagttcggcgaagcacag
aagaacctaaaaaagaaattcaaacgtttttaccagttcggttttaccggtacgccaatt
ttcccgcaaaacgcattagggtcggaaactaccgccagcgtgtttgggcgagagttgcat
tcttacgtgattaccgatgccattcgtgatgaaaaggtgctgaagtttaaggtggactat
aacgatgtccgcccgcagtttaaggcgctggaaaccgaaaccgacgagaaaaaactcagc
gccgcggaaaaccggcaggcttttcttcacccactgcgcattcaggaaatcacacagtac
atcctgaataacttccgccagaaaacacatcgcactttccctagtgccagaggttttaat
gccatgctggcagtaagtagcgtggatgcggcaaaagcatattacgcgacgtttaaagag
ctacaggaggaggcggctaataaatcagccagctataaaccgttgcgggtggcaactatc
ttctcttttgcggctaatgaagaacaaagtgctatcggtgacattactgatgaaagcttt
gataccagtgcaatgaatagcagcgccaaagagtttctggatgcagccattgatgactat
aacgctcactttaaaaccaatttcagcactgacagcaacggctttcagaactattaccgt
gatttagccctgcgagttaaaaatcaggatatcgacctgctcattgtggtgggaatgttt
ttaaccggttttgacgccccgacgctgaacaccctgttcgtcgataaaaacctgcgttat
cacggtttgatgcaggcattctcccgcaccaaccgtatctttgatgctacaaagaccttc
ggcaatattgtgacgtttagagatctggaacgcgcaaccattgatgccatcacgctgttt
ggggataaaaataccaaaaacgtggtgcttgagaaaagttacaaagagtacatggagggc
tttaccgatatcgtgacaggtgaggccaagcgcggctttatggatattgttacgacattg
gaatatcagttccctgatccggctagcattgatagcgagaaggggaaaaaggccttcgtt
aaattgtttggcgaatacctgcgggctgaaaatatcctacaaaactacgacgaatttgcc
atgctgaaagacttgcaaaaagtcgatagtagcgatcccgatgccgtggaaaccttcaag
tcagcgcattatcttgacgatgaaaagtttgccgaattacagaccattcgtctcccctca
gaacgtaagattcaggactatcgttcagcctacaatgatatccgtgactggcagcgtcgc
gaaaaagtggctaatgacaaggataagtcaaccactgactgggatgatgtcgtgtttgaa
attgacctgttgaaatctcaggaaattaacttggactacattcttggtctgatttttgaa
cataacaggcagaagaaaggtaaagaggcactgactgaagaggttagacggttaatccgc
tccagtctgggtaacagggccaaagaaggtctgattgttgactttattcagcagactaat
cttgatgacatgccggacaaagccagcatcattgatgcgttcttcatttttgctcagcgt
gagcagctgcgtgaaattgaagcgttgataaaggaagaaaacctgaacgaagaggctgca
aagcgctatatccgtacatcgctgaaacgcgaatatgccaccgaaaatggtactgagtta
aacgagactctaccaaagcttagtccgttaaacccccagtacaaaacgaaaaaacaaacc
gtttttcagaaaattggtgagtttattgagaagtttaaaggggtaggtgggcaaatttag

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