Pogonomyrmex barbatus (red harvester ant): 105424863
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Entry
105424863 CDS
T04903
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbar03009
]
105424863
Ribosome biogenesis [BR:
pbar03009
]
Eukaryotic type
90S particles
Other 90S particles
105424863
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
TPR_19
TPR_14
Suf
TPR_15
TPR_6
S1_2
ANAPC3
Motif
Other DBs
NCBI-GeneID:
105424863
NCBI-ProteinID:
XP_011633635
UniProt:
A0A6I9VYV6
LinkDB
All DBs
Position
Unknown
AA seq
1384 aa
AA seq
DB search
MTLQSFPRGGKKSEIKKTVDLLFEDKHKPHKPKKSKIQTKKKDENVIVEEINLIATTADR
LSKMMLREGLVLLGRVSEISEYDLLVSIPGGFLGRIVAADLSQSYTSLLQEIIASKAIQS
NEFKTLPDLYKSGDYVVCYVKSINSEEKWFCSLSMEPQLINQNVYSNYLVKDTKIICSIK
SIEDHGYVIDTGMVNVKAFLATEDIDKGKQYFPGIQLLCSIKEIKTVDNVSIIKLSAKKK
KIDNVSTHEITSLDILTPGTKLSLSVRKVLSNGLQVTFGKNNIGYINRIYLDKPLSMYTE
NMKMIGTLLYILPTVKLAYFSLLTDVSEKEKLRIGDIIDKAKVLYRESNGIILKLSKSGL
RGYVSSRKTNVPFDKIPIKFKEGSTHKCRVLAYGWMEHFYICTMEEEILKQKYFSSLDVN
IGDILPVTITHIEPNYIHVQAGKIWGTVSMEHISDDDQSKHKLKVGDNIEARVLDKDYDT
YKNHVKFTLKQSLIKSKLPVLQDLSEAQCGSKYHGTISKVSKKGLLIRFYRSVKGWVPRN
TLNWNTYFSYGQTVKVCVESVKQDEDRMKLRIIEEEEEQQSVSFTVGEIVEGIITESSIK
GISLRIQKEDKVVTGFLPAGHLAPCIDIGKLLASKSAPGDLISAAVFAPKYMSTLILSRT
FVTEEKYKNFESLKVGDCIPCTIRDIVQDGVKVILPIENYSKFGFVSYKNISNYEQLVEN
QILFVKVTAINVRGKLLSLTMSLKDVCDSPLDYKVKLMAAVDILSLYLNKLSELARNTFY
ENRPISSVTLGQKITGTVTKVTEHGLVLQLDNHLMSTVRKDHYIGNPKVGDKVSGVILWK
DYVHELVDVSLLPRIINSISSKQKTLPDLPTDVMLKGQILIITKWLILVLVKRNGTGYLA
ALPVRRHANDISPDLTPYKIHNKIRLYVITKGAESDIVPICMLKSAFEIRKREVVTELSS
IKNKSKKRKKVLEEDDMDLVASSKKISKKENEDKNEDIDEVENKVEVKVKEEENRIKDID
ENSESLSHEESINKEEDEMEEEEEPVIEKSRIPECGFSWDDKANLTATANIETSSDDEEE
PEEEPKRKKKKLSAAERREQERQKEREIRQREEALASNQMPNSIDQFDKLVLSSPDSSLI
WLQYMAYHLQATEIDKARAVAKQAIKTINFREENERLNVWNAWLNLESRYGTAESLKDVF
QEAVRTNDAYKVYLHMLTVHAEAGRTTELEKLVSTVIAKFKQNPQTWIDCGSALLKIGMK
EKSRQIMQRALQSLPASQHVNLLVTFANLENKLGDKERAYTLFENVLSSYPKRVDVWSCY
VDCLIKSENIDVARKVLEQASVLTLPLRKMKVLFSKYLAFEEKYGTPEAADRVRQMIADY
VKRL
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgacgctacaaagttttcctcgaggaggaaagaaatccgaaattaaaaagactgtagat
ttgctttttgaggataaacataaaccgcataaacccaagaagagtaaaatacagacaaag
aaaaaagatgagaatgtaattgtagaggaaataaatcttattgctactactgcagatcgt
ttatccaaaatgatgttacgtgagggactggtacttcttggacgggtttctgaaatatca
gaatatgatttattagtgtctattcctggtggattcttaggacgtatagtagctgcagat
cttagtcagtcatatacaagtctattacaagaaataattgcttcaaaggctattcagtct
aatgaatttaaaactttaccagatttatataaatctggtgactatgttgtatgctatgtc
aaaagtattaacagcgaagaaaaatggttctgtagtttatctatggaaccacaattgata
aatcagaatgtttatagtaattatcttgtaaaagatacaaaaataatttgtagcatcaag
agcatagaagaccatggctatgtaattgatacaggcatggttaacgttaaagcgtttctt
gctactgaagacattgacaaaggaaagcaatattttccaggtattcaacttttgtgttct
atcaaagaaataaaaacggtagataatgtatctattatcaaattgtcagctaagaagaaa
aagattgataatgtcagcacgcatgaaataacatccttagacattttaactccgggaaca
aaattgtctctttctgtaagaaaggtgctctctaatggcttgcaagttacatttggaaag
aataacataggatacataaatcggatttacttggataaacccttatctatgtatacagaa
aatatgaaaatgattggcacattgttatacatattaccaactgtgaaattagcatatttt
agtttattgactgacgtatctgaaaaggaaaagttgcggataggcgacattatagacaaa
gccaaagttttatatagagaatctaatggcataatactgaagttgtctaaatctggatta
cgtggatacgtttcttcgcgaaaaacaaatgtcccgtttgacaaaattccaatcaagttc
aaggaaggttctacgcataaatgtagagtactcgcatacggctggatggaacatttttac
atctgtacaatggaagaagaaattttaaagcaaaagtatttttcatcccttgatgttaat
atcggcgatattctgcctgtgactatcacacatattgaacctaactacatacatgtgcaa
gcgggaaagatttggggaactgtctcaatggaacatatatctgatgatgatcagagtaaa
cataaattaaaagtcggagataacatcgaggcgagagtcttggataaagactatgacaca
tataaaaatcatgtgaagtttacgctaaagcaatcgttaataaaaagtaaattaccagtt
ttgcaggatcttagcgaagctcaatgcggatcgaaatatcacggtacgatcagcaaagtg
agtaagaaaggcttgttgataaggttttatcggtcagtgaaaggatgggtcccacgtaat
acattgaactggaatacatatttctcctatggtcagacagttaaggtatgcgttgagtcg
gtgaaacaagacgaagatagaatgaaactgagaattatcgaagaagaggaagaacaacaa
tctgtcagttttacggttggagaaatagttgaaggaataataacggaatcatccattaag
ggaatatctttgaggatacaaaaagaggataaagttgtaacaggctttttaccagcaggt
catctggccccgtgtatagatatcggtaaattactggcctctaaatctgctcccggggat
ctaatttcggctgctgtgtttgctccaaaatatatgtcaactttaatattatcacgcact
tttgtgacagaggaaaaatataagaattttgaatcattaaaagtgggcgattgcattcca
tgcacaatccgtgatatcgttcaagacggcgtaaaggtcattttgccgatcgaaaattac
tcaaaatttggattcgtgtcatacaagaatattagcaattatgagcaattagtcgaaaat
cagatattattcgttaaagttaccgccatcaatgtacgaggaaaactactgtctttaacg
atgtcgttgaaagatgtgtgtgatagtccacttgattacaaagtcaagttgatggcagca
gtggacatcctgagtttgtacctcaataaattatcggagctagcaaggaacacattttac
gagaacagaccgatctcgtcggtaactctgggtcaaaagatcacgggcactgttacgaaa
gtaactgaacatggtctggtgcttcagttagataatcatttgatgagtacagtacgtaaa
gatcattacattggtaatcctaaagtcggggacaaggtatctggtgtgattttgtggaaa
gattacgtccatgaactcgttgatgtatcattactaccaagaataatcaacagcattagc
tcgaaacaaaaaacattaccagatttacccactgatgtcatgttaaaagggcagatcctt
ataattactaagtggctgatactcgttctcgtaaagcgtaacggtacgggatatttggcg
gcattgcctgtccgtcgacacgctaacgacatttctcccgatttgacaccttacaagatt
cacaataaaatacgattgtatgttataacgaagggagccgagtccgacattgttccaatt
tgtatgctgaagtctgcttttgaaattcggaaaagagaggtcgtaacggagttatcttcc
atcaaaaataaatcgaaaaaaagaaaaaaagtactcgaggaagacgatatggatcttgta
gcttcatcaaagaaaatatcgaagaaagaaaatgaagataaaaatgaagatatagatgaa
gttgaaaataaagttgaagtcaaagtcaaagaagaagaaaatagaataaaagatatagat
gaaaattctgaatctctctcacacgaagaatctattaacaaagaagaagatgaaatggag
gaggaggaggaaccggtaatagaaaaatcgcgtattccggaatgtggattttcttgggac
gacaaagcaaatttgactgctaccgccaatatcgaaacatccagtgacgacgaagaggaa
cccgaagaggaacctaaacggaagaagaagaaattgagtgcggctgagcggcgggagcaa
gaacgacagaaggaacgtgagatccgtcaacgggaagaagctctggcaagcaatcagatg
cccaattcaatcgatcaattcgacaaattggttttgtcgagccccgacagttcattgata
tggctgcagtatatggcgtatcacctgcaagccacggagatcgacaaggcaagagcggtt
gcaaaacaagctatcaaaacaatcaattttagagaagagaacgaacgattgaacgtgtgg
aatgcatggttgaatcttgagtccagatatggtaccgctgaatccttgaaggatgtattc
caggaagccgttaggacgaacgatgcttacaaagtatacttgcacatgctaactgtacac
gcggaggctggtagaacgaccgagctcgaaaaattggtcagcactgtaatcgccaagttc
aaacagaatcctcagacgtggatagactgtggcagcgcgttgctgaaaatcggtatgaaa
gaaaagtcgcgacaaatcatgcaacgggcattacaatccctgcccgcatctcagcatgta
aatcttctggtaacctttgcaaatttggagaataagctaggagacaaagaacgggcatat
acgttattcgagaacgtcctgagctcttatcccaaacgtgttgatgtgtggtcatgttac
gtggattgcttgataaagtctgagaacattgatgtagctaggaaagtgttggaacaagcc
agtgtcctgacattaccattgagaaaaatgaaggtccttttctcaaaatatcttgctttc
gaggaaaaatatggtacacccgaggctgcagatcgtgtacggcagatgattgcggattat
gtaaagagattgtaa
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