Paraclostridium bifermentans: KXZ80_13155
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Entry
KXZ80_13155 CDS
T07479
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pbif
Paraclostridium bifermentans
Pathway
pbif00470
D-Amino acid metabolism
pbif00550
Peptidoglycan biosynthesis
pbif01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbif00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KXZ80_13155 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KXZ80_13155 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbif01011
]
KXZ80_13155 (murD)
Enzymes [BR:
pbif01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
KXZ80_13155 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pbif01011
]
Precursor biosynthesis
Amino acid ligase
KXZ80_13155 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
MurD_N
Shikimate_DH
PTS_IIB
2-Hacid_dh_C
NAD_binding_7
DUF5491
Motif
Other DBs
NCBI-ProteinID:
UAG17713
LinkDB
All DBs
Position
complement(2717829..2719187)
Genome browser
AA seq
452 aa
AA seq
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MDLKNKNVLLVGLAKTGVSTIKKLNKLGANIIVNDIKPKEKLEGIIEEIDNLDNIEYVLG
KHLESIENIDLTIVSPGVPLDLPFIEKIKSEGIKIIGEVELAYKLSKNPTFIGITGTNGK
TTTTSLVGEMFKKANKDTYIVGNIGNPVIDTVDLTNENSYLVTELSSFQLESIEDFKPKV
STIINITEDHLNRHHTMENYINAKARVFKNQDKTDFTILNYDDSIVRDLGKNSNGNVLYF
SIKEEVKQGAYLDKNNNIVIKVDGKELVLMNKSELSLPGNHNLENAMSAILMAYVLNIDT
DVIIDTLRTFKGVEHRLEFVTNKDGIMFVNDSKGTNPDSTIKAITSYERPIVLIAGGYEK
QSDFTEMIEYATKNVKALVLLGQTAEKIETTAKEHGINNISKVEDMEAAVKKAYEIAESG
DVVLLSPACASWDMYPNFEARGLDFKENIYKL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaaaataaaaatgtcttacttgtaggactagcaaaaactggcgtatcaact
ataaaaaaattaaataaattaggtgcaaatatcatagtaaatgatataaaacctaaggaa
aaattagaaggaataatagaagaaatagataatttagataatatagaatatgttttaggt
aaacaccttgaaagtatagaaaacatagatttaactatagtatctcctggagttccttta
gacttgccttttatagaaaaaataaaatctgaaggcattaaaataataggagaagttgaa
ttagcatataaactatctaaaaatcctacattcataggaataacaggaacaaatggaaaa
actactactactagcttagtaggagagatgtttaaaaaagcaaataaagatacatatata
gttggaaatataggtaatccagttatagacactgttgatttaactaatgaaaactcatat
cttgtaacagagttaagtagtttccaattagaaagtatagaagactttaaacctaaagta
agtactataataaatattacagaagatcatttaaatagacaccatactatggaaaattat
ataaatgctaaagctagagtgtttaagaatcaagacaagacggattttactatactaaac
tatgatgattctattgttagagatttaggtaaaaacagcaatggaaatgttttatacttc
tcaataaaagaagaagtaaagcaaggtgcatatctagataaaaataacaatatagttata
aaggtagatggtaaagaattagttcttatgaataaatctgaattgagcttaccaggaaac
cacaatttagaaaatgcgatgtcggctattttaatggcatacgtattaaatatcgatact
gacgttataatagacacattaagaacatttaaaggtgtagagcatagattagagtttgtt
acaaataaagatggtattatgtttgtaaatgactctaaaggaacgaacccagattcaact
ataaaagctataacttcatatgagagacctatagttttaatagctggaggatatgaaaag
caaagtgactttacagaaatgattgaatatgcaacaaaaaatgtaaaggctctagtccta
ttaggacagactgcagaaaaaatagaaacaactgcaaaagaacatggaattaataatata
tcaaaagttgaagacatggaagctgcagtaaaaaaagcttatgaaatagctgaatcaggg
gatgtagttttattatcaccagcttgtgcaagttgggatatgtatccaaacttcgaggca
agaggattagacttcaaagagaatatatataaattatag
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