Paraclostridium bifermentans: KXZ80_13170
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Entry
KXZ80_13170 CDS
T07479
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
pbif
Paraclostridium bifermentans
Pathway
pbif00550
Peptidoglycan biosynthesis
pbif01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbif00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KXZ80_13170
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbif01011
]
KXZ80_13170
Peptidoglycan biosynthesis and degradation proteins [BR:
pbif01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
KXZ80_13170
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GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
UAG17715
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All DBs
Position
complement(2721832..2723811)
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AA seq
659 aa
AA seq
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MSKIKRLSKKRLVIVLILACFVFTMLIFRTGYLQIIKGDWLTEKALDQQTRDIPIEPKRG
TIYDRNMKELAVSVTKYTVWAKPVEVKDKEKSAKVISEMIGEDYDDVLKLLKKKNMALVK
VKRWIDDKTAEKIRDSKLPGIWVAEDNQRYYPYGNFAPYVIGHTSDDATGIAGIEMQYDK
HLKGKPGRLIVSTDASGREIPHGMEKYYEPVQGNGLVLSIDEVIQHYTEKAVQKAYEINN
AKRVTAIALDPKTGDILSMASKPDYDPNDSRTPIYPYYEEELEKYSDKDKIKGYFSMWRN
PAVSDTYEPGSTFKLITSSASVEEGVIKDGEKFVCTGSVTVGGRKLKCWRHYRPHGAQEF
KQAVQNSCNPVFVELGQRLGVSKMYDYIEGFGFMDKTNIDLPGEAKGILYNEKNVGPVEL
ATISFGQSISVTPMQLISAIGSIANDGKLMEPRVVKSKVDNQGNVTENIKPKVVRQVISE
DTSKKMLEIAESVVSEGSGKAAYIPGFKIGGKTGTAQKVIDGKYAQGKYICSFVGIAPCD
DPQIVVLAIVDEPTGVSAFGSTTAGPIVKEIMNDSLKYLGVEPKYTDEEKQEYEKPKVKV
PNIIDLSIEDALKVLEENKLKPIQDTDTEVDGSAKVKEIFPPAGSEVPQDSGIVIYTDN
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaaaataaagagattgagtaaaaaaaggttagtaattgttttaatactagcatgc
tttgtttttacgatgcttatatttaggactggatacttacaaataattaaaggggattgg
cttacagaaaaagctttagatcagcaaacaagagatataccaatagaacctaaaagaggt
actatatatgatagaaatatgaaagagcttgctgtaagtgttactaagtatactgtttgg
gctaaaccggttgaagttaaagacaaagaaaaatcagctaaggtaatatctgaaatgata
ggtgaagactatgatgatgttttaaaattgttgaaaaagaaaaatatggctttggtaaaa
gtaaaaagatggatagatgataaaacagcagagaaaataagagactctaaattaccaggt
atatgggtagctgaggataatcaaagatattatccatatgggaattttgctccatacgta
atcggacatacatcagacgatgcaacaggaattgctggtatagaaatgcaatatgacaaa
cacttaaaaggaaaaccaggaagacttattgttagtactgatgcatcaggaagagaaatt
cctcatggtatggaaaaatattatgagccagtgcaaggaaatggattagttcttagtata
gatgaagtaattcaacattacactgaaaaagcagttcaaaaagcttatgaaataaataat
gctaaaagagttacagcaatagctttagacccaaaaactggcgacattttatctatggca
tcaaaacctgactatgatccaaatgattcaagaacaccgatatatccatactacgaagaa
gagcttgaaaaatatagtgataaagataaaataaaaggatatttctcaatgtggagaaat
cctgcagttagtgatacgtatgaaccgggatctactttcaaacttataacatcatccgca
tctgtagaagagggtgttataaaagatggagaaaaatttgtatgtacaggtagtgttact
gtaggtggaagaaaattgaaatgttggagacattatagaccgcatggagcccaagaattt
aaacaggcagtccaaaattcttgtaatccagtttttgttgagttagggcaaagattaggg
gtgtctaagatgtatgattatatagaaggatttggattcatggataaaactaatatagat
ttacctggagaagctaaaggtattttatataatgaaaaaaatgtaggacctgtagagtta
gcaactatatcatttggtcaatctatatctgttactcctatgcaattaataagtgcaata
ggttcaatagcaaatgatggaaaacttatggaaccgagagtagttaaatcaaaggttgat
aatcaaggaaacgtaacagaaaatataaaaccaaaggtagttagacaagtaatatcagaa
gatacatctaaaaaaatgttagaaatagctgaatctgttgtaagtgaaggatctggtaaa
gctgcatatatacctgggtttaaaataggtggtaaaacaggaacagcacaaaaggttata
gatggtaagtatgcacaaggtaaatatatatgctcctttgtagggatagctccttgtgat
gatccacaaatagtagtattagctatagtagatgaaccaactggagttagcgcatttggt
agtacaacagcaggacctatagtaaaagaaattatgaatgattcattaaaatatttaggg
gttgaacctaaatatacggatgaagaaaagcaagaatatgaaaaacctaaggtaaaggta
ccaaatattattgacttaagtatagaagatgctttaaaggtattagaagaaaataaatta
aaaccgatacaagatacagatacagaggttgatggaagtgcaaaggttaaagaaattttc
cctcctgcaggatcagaagtaccacaagattctggaatagtaatttacacagataattaa
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