Paraclostridium bifermentans: KXZ80_16445
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Entry
KXZ80_16445 CDS
T07479
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbif
Paraclostridium bifermentans
Pathway
pbif03420
Nucleotide excision repair
pbif03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KXZ80_16445
03430 Mismatch repair
KXZ80_16445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbif03400
]
KXZ80_16445
Enzymes [BR:
pbif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KXZ80_16445
DNA repair and recombination proteins [BR:
pbif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KXZ80_16445
MMR (mismatch excision repair)
Other MMR factors
KXZ80_16445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
DEAD
PhoH
Viral_helicase1
SLFN-g3_helicase
ResIII
AAA_11
Longin_2
NACHT
T2SSE
FtsK_SpoIIIE
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UAG19909
LinkDB
All DBs
Position
unnamed1:complement(65932..68169)
Genome browser
AA seq
745 aa
AA seq
DB search
MSLNNYELNLENEWLQRVLTEANKQLDEKRSAKDRFKKDAIETQRELWSDLGSVSIENGL
DQLSDFMSFMDIMKNQKRSHEFTQKLEEKYERMLESPYFGRIDFVEDNQSDAQKCYIGLS
NLVDEDYDFLVYDWRAPISSMFYDYETGQASYECPEGTISGEITGKRQYKINNGKIEYMF
DSNLSIDDEMLQELLSKNADDKMKGIVTTIQREQNQVIRNENYKNLIVQGAAGSGKTSVA
LHRIAYLLYKHRDKVTPQNIIIFSPNNIFNDYISNVLPQLGEDNMYQTTFKDYMHKELGP
EFKKESPSEMMEYILGSNEKLTYQDRIKNIKFKTSVEFVEILKQYISYVETVDRSFKDIV
VRGKLIISSEDIKNLFFNDYSNLPIKRRLEKIKSRIIFLIEPYEQSWIDEIYQELFKSGD
FIQKEEMIEKSTLIVKENLRDVYDSISKMTEFKLIEIYKDLFKNLNTFLNEINVEYDDSF
ISHIKTYTIDNLNAKILNYEDQVALLYLKGALGDIPTTSQIKYVIIDEAQDYTPLQYEIF
YQLFKSANMTILGDINQSINPFMNVGNYNNIYNISQNDTCIINLTKSYRSTMEITKFSRN
LLSEHIDDECVERHGDEPTVAAFSDKLYMNEKLVEDIKSYSEKNYKSIGIITKTARETKD
LYNFLKESSIDVSSVEKDDDYYTNGVTVIPSYLAKGLEFDVVFIYDASNINYNSENERLL
LYTCCTRALHVLNVYHLGEITNLFK
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgagtctaaataattatgagttaaatcttgaaaatgaatggttacaaagagttcttacc
gaggctaataaacagcttgatgaaaagcgtagtgctaaagatagatttaaaaaagatgct
atagaaacacaaagagaactctggagtgatttaggatctgtttctatagaaaatggatta
gatcaactttcagattttatgtcatttatggatattatgaaaaatcaaaaaagaagtcat
gaatttacccaaaaacttgaagaaaagtatgaaagaatgcttgaatctccttatttcggt
cgaatcgactttgttgaagataaccaatcagatgcccaaaagtgttatattggattatca
aatcttgttgatgaggattatgattttcttgtgtatgactggagagcacctatttcaagt
atgttttatgactatgaaactggacaagccagttatgaatgtccagaaggtacaatatct
ggagaaatcactggtaaaagacagtataaaatcaataatggtaaaattgagtatatgttc
gatagtaacctaagtattgatgatgaaatgttgcaagaacttctgagtaagaatgctgat
gataagatgaaaggtatagttacaactattcagagagagcaaaatcaagtaattcgtaac
gaaaattataaaaacctaattgttcaaggagctgctggaagtggaaaaacttctgttgca
cttcatagaattgcatatctattatataaacatagagataaagtaacacctcaaaatata
ataatattttctccaaataatatcttcaatgattatatttcaaatgtattacctcaactt
ggtgaagataatatgtaccaaacaacctttaaagattatatgcataaagaattagggcct
gaatttaagaaagagtcaccttcagaaatgatggagtatatacttggttctaatgaaaaa
ttaacatatcaagatagaatcaaaaatataaaatttaaaacatctgtagaatttgttgaa
attctaaaacagtatataagttacgtagagacagtagatagaagttttaaagatattgtt
gtaaggggtaagttaataatttcttctgaagatataaaaaacctattttttaatgattat
tcaaatcttccaattaaaagaagattagaaaaaattaaatcaagaatcatattccttatt
gaaccatatgaacaatcttggattgacgaaatatatcaagaactttttaaatctggagac
tttattcaaaaggaagaaatgatagaaaaaagtacgctaattgtaaaagaaaatttaaga
gatgtatatgattctatttctaaaatgacagaatttaaattaattgaaatttacaaagat
ctatttaaaaatttaaatacatttttaaatgaaataaatgttgaatatgatgatagtttt
ataagtcatataaaaacttacacaatagataatttaaatgcaaagatacttaattatgaa
gatcaagttgcacttttatacttaaaaggagcacttggtgatatcccaactacttctcaa
attaagtatgtaattatagatgaagcacaagattacactccattgcagtatgaaattttt
tatcaactttttaaatctgctaacatgactatattaggggatataaatcagtcaattaat
ccatttatgaatgttggaaactataacaacatttataatatatcccaaaatgacacttgc
ataataaacctaacaaagagctatcgttcaactatggaaatcactaaattttcaagaaat
cttctaagtgaacatatagatgatgagtgcgttgaaagacacggtgatgaacctactgtt
gctgctttctcagataaactttatatgaacgaaaaactggttgaagatataaagtcttat
tcagaaaaaaattataaatctataggaattattactaaaacagctcgtgaaaccaaagat
ttatataactttttaaaagaaagtagtatcgatgtaagttctgtagaaaaagatgatgat
tattatacaaacggagtaacagtaatcccttcatatctggctaaagggcttgagtttgat
gttgtttttatatatgatgctagtaatataaattataatagtgaaaatgaaagattgctt
ctttacacttgttgtacaagagctcttcatgtattaaatgtatatcatttaggagaaata
acaaatttatttaaataa
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