Paludisphaera borealis: BSF38_03055
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Entry
BSF38_03055 CDS
T04622
Name
(GenBank) hypothetical protein
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pbor
Paludisphaera borealis
Pathway
pbor00521
Streptomycin biosynthesis
pbor00523
Polyketide sugar unit biosynthesis
pbor00541
O-Antigen nucleotide sugar biosynthesis
pbor01100
Metabolic pathways
pbor01110
Biosynthesis of secondary metabolites
pbor01250
Biosynthesis of nucleotide sugars
Module
pbor_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pbor00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
BSF38_03055
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BSF38_03055
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BSF38_03055
Enzymes [BR:
pbor01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
BSF38_03055
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Motif
Pfam:
dTDP_sugar_isom
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
APW61539
UniProt:
A0A1U7CRL8
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Position
complement(3910688..3911176)
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AA seq
162 aa
AA seq
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MSDTITYVDGDIEGVEIRYLKTFRDNRGWLIEVFRHDDLAKDRWPVMTYISSTLPGVARG
PHEHVDQTDGFAFIGPSDFKLYLWDTRPDSKTYGNKIVQVLGESKPAAVWIPPGVVHAYR
NVGDVPGLVLNAPNQLYAGWGKKDPVDEIRHEEADPPKFILD
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacacgatcacgtacgtcgacggcgacatcgagggcgtcgagatccgctatttg
aagaccttccgcgacaatcgcggttggttgatcgaggtcttccgccacgacgatctcgcc
aaggatcgctggccggtgatgacgtacatctcctcgaccctgccgggcgtggcgcgcggg
ccgcacgagcacgtcgaccagaccgacggtttcgcgttcatcgggccgtccgacttcaag
ctctatctgtgggacacgcgtcccgacagcaagacctacggcaacaagatcgtccaggtg
ctgggcgaatcgaagccggcggccgtctggattccgcccggggtcgttcacgcctatcgc
aacgtcggcgacgtcccgggactcgtgctcaacgcccccaaccagctctacgccggatgg
ggcaagaaagacccggtcgacgagatccgccacgaagaagccgatccgccgaagttcatc
ctggactga
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