Parvularcula bermudensis: PB2503_00120
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Entry
PB2503_00120 CDS
T01298
Name
(GenBank) hypothetical protein
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
pbr
Parvularcula bermudensis
Pathway
pbr00550
Peptidoglycan biosynthesis
pbr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PB2503_00120
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pbr01002
]
PB2503_00120
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbr01011
]
PB2503_00120
Enzymes [BR:
pbr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PB2503_00120
Peptidases and inhibitors [BR:
pbr01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
PB2503_00120
Peptidoglycan biosynthesis and degradation proteins [BR:
pbr01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
PB2503_00120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
PI-TkoII_IV
Motif
Other DBs
NCBI-ProteinID:
ADM10793
UniProt:
E0THY2
LinkDB
All DBs
Position
complement(2827741..2829156)
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AA seq
471 aa
AA seq
DB search
MDAHQALAGLRYGISVTDLDGNVLIAHRSEERFMPASNAKLFVTAAALAAAAELSAVERG
LQVMSVRGSSGLPSLTLVGRGDPTVGFGPGCEMPCLETLAEAVADSGITEIEDIVGDDRW
FADERRPLGWSWDDLKFGYATSISSIAVNDNILPLRVRPSESPGAQVQTAWLDAGDGYFT
LQNQAKTSASSGELALRLERREGERAARLYGEMPSGSRSMTLDLGVDDPAHLAVWYFEQA
LKAEGVTVQGELRSRHRALQYTDETIKADLDDPDSPKTCRVSPPVKSDGVVIASLPATPI
RDIVNTINRDSQNLYAEVLLRQLGWIEGTASSFCGLLHIERFLNDVGVPRSSYDFADASG
LSSYNRVTPATITALLRYAAAQDWGDAYRESLPVGGAPIGTLKYRFRGTALENNVFAKTG
TLNHVDALSGYLVAQSGKVLVFSIIVNDRPLESLSAMERIESLLLQIAEQH
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcaccaagctcttgccgggctgcgttatgggatctcggtgaccgatctcgac
ggcaatgtccttatcgcccatcgttcggaagaacggttcatgcccgcgtcgaacgcgaaa
ctgttcgtgacggcagcggcgctcgcggcggcggcggaattgtctgcggtcgagcgaggg
ctgcaggttatgtcagtgcgcggaagctcgggattgccgagcctgacgctggtcggccgc
ggagacccgacggtcgggtttggacctggttgcgaaatgccatgtctggaaacactcgct
gaggctgtggcggatagcggaatcacggagattgaagacatcgttggcgacgaccgttgg
ttcgctgacgaacgccgtcctctcggctggagttgggacgatcttaagtttggctatgca
acatcgatctcatcgatcgccgtcaacgacaacatccttcccctgagggtgcggccgtct
gagtcgcccggggcacaagtacaaacggcgtggcttgatgcgggggatggatacttcacc
cttcaaaaccaagcaaagaccagcgcgtccagcggtgaactggccttacggctagagcgg
cgtgagggagagcgggccgccagactctacggagaaatgccaagcgggtcgcgatcaatg
accctcgatctcggcgtcgacgaccccgctcacctggcagtttggtacttcgaacaggcc
ctcaaggccgagggtgtgactgttcagggcgagcttcgatcacggcatcgggccttgcag
tatacggatgagacgatcaaggcagacttggatgatccagactcgcccaagacgtgccgc
gtttctccaccagtaaaatccgatggagtggttatcgcatcgctcccggcaacgccgatc
cgcgacatcgtgaacacgatcaaccgcgatagccaaaatttgtacgctgaggtcctccta
cggcaattggggtggattgaggggacggcctcatccttttgcggactgctgcatatagaa
cgcttcttgaacgatgtcggtgtccctcgttcctcctacgatttcgctgacgcgtctggc
ctttccagctataaccgtgtgacacccgccaccataacagcgctcctgcgatatgcggcc
gctcaagactggggcgatgcctaccgtgaaagcttgcctgttggcggcgcaccgatcggt
acgctgaaatacagatttcgaggaacagcgctggaaaacaacgtctttgcaaagacgggg
acgctcaaccatgtcgacgcgctgtctggctacctagtagcgcaaagcggaaaggtgctg
gtgttctcgatcatcgtaaatgaccggccattggagtcgctctccgcgatggagcggatt
gaaagcttgctgctccaaatagccgagcagcactag
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