Pectobacterium brasiliense: B5S52_13860
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Entry
B5S52_13860 CDS
T06364
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pbra
Pectobacterium brasiliense
Pathway
pbra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B5S52_13860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbra03019
]
B5S52_13860
Enzymes [BR:
pbra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B5S52_13860
Messenger RNA biogenesis [BR:
pbra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B5S52_13860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
ARA76914
UniProt:
A0A3S0ZWB0
LinkDB
All DBs
Position
complement(3061763..3063175)
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AA seq
470 aa
AA seq
DB search
MSFDSLGLSADILRAIDEQGYRDPTPVQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLL
QLLTSREAQHKGKGRRPVRALILTPTRELAAQIDENVKAYSKYLSLRSLVVFGGVSINPQ
MMKLRGGVDILVATPGRLLDLEHQRAVDLSQVEILVLDEADRMLDMGFIHDIRRVLAKLP
AKRQNLLFSATFSDEIKALANKLLTNPASVEVVRRNTPSELVTQHVHFVDKRRKRELLSQ
LIGENNWQQVLVFTRTKHGANHLAELLEKDGITAAAIHGNKSQGARTRALANFKDGSIRV
LVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAEATGEALSLVCVDEHKLLR
DIERLLKREIPRIAIEGYEPDPSIKAEPIVNGRQGNRGGGGARNASPRAQSGAPRGQGER
RPADGNRQPRKAGGNSDSPWGGNKGNSGKGSGEGQRRAPRPQNRSKPADK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgattctctcggcctgagtgccgatattctgcgcgcgattgacgagcagggt
tatcgcgatcctactcctgtccagcgtcaggcgattcctgttgtgctggaagggcgcgat
ttaatggccagcgcacaaaccggtacgggtaaaacagcgggctttacgctgccgttatta
caattgctgaccagccgtgaagcgcagcataaagggaaaggccgccgtccggtacgcgcg
ctgatcctgacaccaacccgtgagttggctgcgcagattgatgaaaatgtgaaggcgtat
agcaagtatctgagcctgcgttcactggtcgtatttggtggggtgagcattaacccacag
atgatgaaactgcgcggtggcgtagatattctggtggcaacgccggggcgtctgctcgat
ctggagcatcagcgcgccgttgacctgtcacaggttgaaattctggtgctggatgaagcg
gaccgtatgctggatatgggcttcattcacgacattcgccgagtgctggcgaagctgcct
gctaaacgtcaaaacctgctgttctccgcgaccttctctgatgagatcaaagcgctggcg
aacaagctgctgactaatcccgcttcggttgaagtcgtgcgtcgtaatacgccgtctgaa
ctggttacgcagcacgtgcattttgttgataagcgtcgcaagcgtgaactgttgtcgcag
ctgattggtgaaaataactggcagcaggtgctggtgtttacccgcaccaagcacggcgct
aaccatctggctgagctgctggaaaaagacggcattaccgctgccgctatccacggcaat
aaaagtcagggggcgcgtacgcgtgcgctggcaaactttaaagacggcagcattcgtgtg
ctggtggcgacggatatcgccgcgcgtggtctggatatcgaccaactgccgcacgtggtg
aactatgagctgccaaacgtgccggaagattacgttcaccgtatcggtcgtaccggtcgt
gcggaagcaacgggtgaagcgctgtcactggtctgtgtggatgagcacaaactgctgcgc
gacatcgagcgtctgttgaagcgtgagatcccacgtatcgctatcgaaggctacgagccg
gatccgtccatcaaggccgagccgattgtgaatggtcgtcagggcaaccgtggcggcggc
ggtgcgcgtaacgcctctcctcgcgcacagtctggcgcgccacgtggtcagggcgaacgc
cgtccggccgatggcaatcgccaaccgcgtaaagcgggcggcaatagcgatagcccgtgg
ggtgggaataaaggcaatagcggtaagggcagtggcgaaggccaacgccgcgcaccgcgt
ccgcaaaaccgcagtaagccagcggacaagtaa
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