Pectobacterium brasiliense: B5S52_18085
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Entry
B5S52_18085 CDS
T06364
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pbra
Pectobacterium brasiliense
Pathway
pbra02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B5S52_18085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbra03021
]
B5S52_18085
Transcription machinery [BR:
pbra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B5S52_18085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
GerE
HTH_28
Phage_antitermQ
HTH_11
Motif
Other DBs
NCBI-ProteinID:
ARA77684
LinkDB
All DBs
Position
complement(4055310..4055834)
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AA seq
174 aa
AA seq
DB search
MKSPAAVCPNQPETLTVQQIYHDHHAWLQAWLRRRLGCSQQAADLAQDTFLRLICQHQTD
RIREPRAWLTTVAHGLVVNHWRRKDIENAYLQVLAEQEFTFSPSLEQQAMVIDALMAIDQ
MLATLPGKVRQAFLLVHLDGLTYRQVAEQLAVSERMVKKYMAQAMLNCLLCQDL
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
gtgaagagtcccgccgctgtctgccccaatcagcctgaaaccttaaccgttcagcagatt
tatcatgaccatcatgcctggttacaggcgtggctgcgtcggcgtttggggtgttcacag
caggctgcggatctggctcaggatacgtttctacgtttgatctgccaacatcagaccgat
cgcattcgtgaaccgcgtgcctggctaacgacggttgcccacgggctggtggtcaatcac
tggcgacgtaaagacatcgagaatgcctatcttcaggtgctggcagagcaggagtttact
ttttctccctcgctggaacagcaggctatggtgattgatgcgctgatggccattgaccaa
atgctggcgacgctgccgggcaaagtgcgtcaggcattcttgcttgtgcatcttgatggc
ctgacctatcggcaggttgctgaacaattagccgtttccgagcggatggtgaaaaaatat
atggcacaggcaatgctgaattgtctattgtgtcaggacttatga
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integrated database retrieval system
