Pseudonocardia broussonetiae: HOP40_03105
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Entry
HOP40_03105 CDS
T07210
Symbol
sigE
Name
(GenBank) RNA polymerase sigma factor SigE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
pbro
Pseudonocardia broussonetiae
Brite
KEGG Orthology (KO) [BR:
pbro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbro03021
]
HOP40_03105 (sigE)
Transcription machinery [BR:
pbro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HOP40_03105 (sigE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
QJY44946
UniProt:
A0A6M6JBM4
LinkDB
All DBs
Position
complement(639986..640597)
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AA seq
203 aa
AA seq
DB search
MTDGLATATAPQPAGTVLPGEGAPWTPPTWDEVVREHADRVYRLAYRLTGNPHDAEDLTQ
ETFVRVFRNLASYRPGTFEGWLHRITTNLFLDMVRRRARIRMEALPDDSERIPGRGPEPE
QVFSDTHLDPALQAALDELPPEFRAAVVLCDVEGLSYEEIGATLGVKLGTVRSRIHRGRA
ALRAAIERDRAAAGAPVQEEVRA
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacggcctggccaccgccaccgccccccagcccgcggggacggtgctgcccggt
gagggtgcgccgtggaccccgccgacgtgggacgaggtcgtgcgcgagcacgcggaccgg
gtctaccgcctcgcctaccgcctcaccggcaacccgcacgacgccgaggacctcacccag
gagacgttcgtccgggtgttccgcaacctcgcgtcctaccgccccggcacgttcgagggc
tggctgcaccggatcaccaccaacctgttcctcgacatggtccgccgccgcgcgcgcatc
cgcatggaggcgctccccgacgactcggagcgcatccccggccgcggcccggagcccgag
caggtcttctccgacacccacctcgacccggcgctgcaggccgcgctcgacgagctgcca
ccggagttccgcgccgccgtcgtcctgtgcgacgtcgagggcctgtcctacgaggagatc
ggtgccacgctcggcgtgaagctcggtacggtgaggagcaggatccaccgcggccgcgcc
gcgctgcgcgccgcgatcgaacgcgaccgggccgctgcgggcgcgccggtgcaggaggag
gtcagggcatga
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