Paraburkholderia bryophila: NDK50_09490
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Entry
NDK50_09490 CDS
T08797
Symbol
vgrG
Name
(GenBank) type VI secretion system tip protein VgrG
Organism
pbry
Paraburkholderia bryophila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_GPD
DUF2345
T6SS_Vgr
Phage_base_V
DUF6484
Sarcoglycan_1
Motif
Other DBs
NCBI-ProteinID:
WCM21658
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Position
1:2107085..2109421
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AA seq
778 aa
AA seq
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MGSIVLPKQAYTLKLAPQPASFSVLKFAGHDALSQLYRYEIEFTSPVADIPMDQVLGRPA
RFMVEPLDPSAGCPQRWIGEHAANLSELPTAQTVHGIVTHFDQFGTSADETHYRLVIEPR
AADLARAVTSRLFQKQSVREIIADALRHGEFREGVDFRFSLRAQYRRHDYITQYHETTLA
FIQRIAADEGIWFRFEQAKGHEVIVFGDDLDAYARRQRVAPLRRDAGLESVGSESVKSLA
RHMRRVPEAVQLNDYNHRQAGMPLLVEQNAAKDERTTNAVESRWGEHYETVEEGRWLAGL
RHEAHLSQQITYAGNGNAFGLEAGEVLGLDSNLAEAPHGLLVTSVESRGGRSDAYSNTFT
AIPSDRVWRTPVVPEKRPVIHGILPARITSPANYPRAYLTGEGWYVIRLPFDLDAWSPGG
TSRPVRLAKPYSGENYGHHFPLIDGAEVAIAFTAGDPDRPVIVGAMHDSLHPDLVNNLNH
TRNLIRTVARNELRMEDRSGSEHVHLTTPFQSSELNLGHLVDEQHKERGQGAELRTDEHV
AIRGGRGVLISADAQPAASGKQLDMQAAQLLLEQALEQMETLADAALAAQAIAAECAKQK
TLLHDKLTDLKQAVVLLAAPAGMGLVCGSHLQMSAGQNLIATASGNVDIGAVKRFTASAG
DAVSLFAQRLGMKLFAAKGKVDIQAQSDAMNLAALKDISITSTDGKLILSAGKEVWIGAG
GSYIRITPQGIENGTPGDILEKCAAWDKQGANSMRVKPGFPPPKNNRPNQKGFFNFSQ
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgatagttctgccgaagcaggcatacacgctgaagctggcgccgcaaccggcg
tcgttttcagtgttgaagtttgcaggccatgacgcgctcagtcagttgtaccgctacgaa
atcgagttcacgagtccggttgccgatatcccgatggatcaggtgctggggcgaccggcc
cggttcatggtcgagccgctggatccgagcgcgggttgtccgcagaggtggatcggcgaa
cacgcggcgaacttaagtgaactgcccacggcgcagacggtgcacggcatcgtcacgcac
ttcgaccagttcggcacgtcggccgatgaaacccattaccgtctggtcatcgagccacgc
gcagcggatctggcgcgcgcggtaaccagccggctgttccagaaacagtctgtgcgggag
atcatcgccgacgcgctgaggcacggcgaattccgcgagggtgtcgacttccggttcagc
ctgcgtgcgcaatacaggcggcacgactacatcacgcagtatcacgagacgacgctggcg
ttcatccagcgtatcgcggcggacgagggcatctggtttcgcttcgaacaggcgaaggga
catgaggtcatcgtctttggtgatgatctggacgcttacgcgcggcgtcaacgggttgcg
ccgttgcggcgcgatgccggtctggaaagcgtcgggtcggagtccgtcaaatcgcttgcg
cggcatatgcgccgggtgcccgaagcggttcaactgaacgactacaaccatcgtcaggcg
ggtatgccgctgcttgtcgagcagaatgccgcgaaggatgagcggacgacgaatgccgtc
gaatcgcgctggggcgagcattacgagacggtggaagaaggccggtggctagctgggttg
cgtcatgaggcgcatctgtcgcaacagattacctacgcgggcaacggtaacgcgttcggg
ctggaagcgggagaggtgctgggactggacagtaatctcgcggaagcgccgcatggtctg
ctggttacgtcggtcgaatcgcgcggcggccgcagcgacgcgtactcgaacacgttcacg
gcaattccgtccgatcgggtctggcgtacgccggttgtgcctgagaagcggccggtgatc
cacggcatcctgccggcgcggatcacatcgccggcgaactacccacgcgcgtatctgacg
ggagagggttggtacgtgatcaggctgccattcgatctcgacgcatggagtcccggtggc
acgagccggccggtgcgacttgcgaagccctacagcggcgagaactacggtcaccatttc
ccgttgatcgatggcgcggaggtggcaatcgcctttacagcgggggacccggaccggcct
gtgatagtcggtgcgatgcacgacagtctgcatcccgatctggtgaacaacctgaatcac
acgcgcaaccttattcgcacggtcgcacggaatgaactgcggatggaggacaggtcgggg
agcgagcatgtccatctgacaacgccgttccagtccagcgagctgaacctgggtcatctg
gtcgacgagcagcacaaggagcgggggcagggggcggagttgcgcacggacgaacacgtt
gcgatccgtggcggtagaggggttctcatctcggccgacgcgcagccagcggcaagcggc
aagcagctcgacatgcaggctgcgcaattattgctggagcaggcgcttgagcagatggaa
acgctcgcggacgccgccctggctgcacaggcgattgccgccgagtgcgccaaacagaaa
acgttgcttcacgacaaattgaccgatctgaaacaggcggtcgttttgctagcggctccg
gcaggcatgggcctcgtttgcggcagtcatctgcagatgagcgctggacagaatctgatc
gctacggcgagcggcaacgttgatatcggtgctgtcaaacggttcacagcctcggctggc
gacgcagtgtcgctgtttgcgcaaaggttgggaatgaagctctttgccgcgaaaggaaag
gtcgacattcaggcccaaagcgacgcgatgaaccttgccgccttaaaagacatatcgatc
acgagtaccgacggcaaattgattctatccgccggcaaggaagtctggatcggtgcgggt
gggtcctatatccggatcacgccgcagggcatagagaacggcacgcctggcgacatcctc
gaaaagtgcgcggcgtgggacaagcaaggcgccaactcgatgcgggtcaagcccggcttt
ccacctccgaagaacaatcggccgaatcagaaaggattcttcaatttttcccagtag
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