Pseudoalteromonas sp. Bsw20308: D172_012895
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Entry
D172_012895 CDS
T04175
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbw03016
]
D172_012895 (truA)
Enzymes [BR:
pbw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
D172_012895 (truA)
Transfer RNA biogenesis [BR:
pbw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D172_012895 (truA)
Prokaryotic type
D172_012895 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
SapB_1
Motif
Other DBs
NCBI-ProteinID:
ALQ08860
LinkDB
All DBs
Position
complement(2931132..2931926)
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AA seq
264 aa
AA seq
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MRVALGVEYNGARYSGWQRQSHVNSVQQEVEKALSRICNHPVEVICAGRTDAGVHGTGQV
IHFDTEADRDMVAFTLGMNTLMPKDIAIRFAQPVADDFHARFSATARRYRYIIYNSPLRG
AVLNEGVTHFHHQLDETKMQEACQYLIGKHDFTSFRAIHCQANTPTRTIHHLSVRRQGTY
VIIDIKANAFLHHMVRNITGSLMDVGLHKHQPIWIKELLDCKERAKASATAKAAGLYLVD
VDYPEQFDIPQTPLGPLFLPDIDV
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtagcacttggagttgaatacaacggcgcacgttatagtggttggcaacgtcaa
tctcatgtaaatagcgtacagcaagaagtagaaaaggcgctgtcgcgcatttgtaatcat
ccagttgaagttatatgtgcaggtcgtacagatgcgggtgtacacggtacaggccaagta
atacactttgacactgaggccgatcgcgatatggttgcatttacactaggtatgaatact
ttaatgcctaaagatattgctattcgttttgctcaacccgttgcagatgattttcacgct
cgttttagtgctacagcacgtcgttatcgttatattatttataactcgcctttgcgagga
gctgtactaaatgaaggcgttacgcatttccatcatcaactagatgaaaccaaaatgcag
gaagcgtgtcagtatttaattggcaaacatgactttacttcttttagggccattcattgt
caagcgaatacaccgacaagaacaattcatcatttatcggtacgtcgccaaggtacttac
gttattattgatattaaagcgaatgcgtttttacatcacatggtgcgtaatatcacaggc
agtttaatggatgttggtttacataaacaccaacctatatggataaaagagctacttgat
tgtaaagaacgcgcaaaggccagtgctaccgctaaggctgctggtttgtatttagtggat
gttgactaccctgagcaatttgatattcctcaaacacctttaggccctttatttttgccg
gatatagatgtttaa
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