Pseudomonas bijieensis: GN234_08805
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Entry
GN234_08805 CDS
T07266
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pbz
Pseudomonas bijieensis
Pathway
pbz00071
Fatty acid degradation
pbz00280
Valine, leucine and isoleucine degradation
pbz00310
Lysine degradation
pbz00362
Benzoate degradation
pbz00380
Tryptophan metabolism
pbz00410
beta-Alanine metabolism
pbz00640
Propanoate metabolism
pbz00650
Butanoate metabolism
pbz00907
Pinene, camphor and geraniol degradation
pbz00930
Caprolactam degradation
pbz01100
Metabolic pathways
pbz01110
Biosynthesis of secondary metabolites
pbz01120
Microbial metabolism in diverse environments
pbz01200
Carbon metabolism
pbz01212
Fatty acid metabolism
Module
pbz_M00087
beta-Oxidation
pbz_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pbz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
GN234_08805 (fadB)
00650 Butanoate metabolism
GN234_08805 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
GN234_08805 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
GN234_08805 (fadB)
00310 Lysine degradation
GN234_08805 (fadB)
00380 Tryptophan metabolism
GN234_08805 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
GN234_08805 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
GN234_08805 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
GN234_08805 (fadB)
00930 Caprolactam degradation
GN234_08805 (fadB)
Enzymes [BR:
pbz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
GN234_08805 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
GN234_08805 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
GN234_08805 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
GN234_08805 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QKS82033
UniProt:
A0A6N1CKL5
LinkDB
All DBs
Position
complement(2055765..2057912)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELIAGNLEANRIFSDFEDLNVPTVVAINGIALGGGLE
MCLAADYRVMSTTAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVEPGKLQEAALETVKRAISGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAASFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIASDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEDKVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEHAIATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFYAYETDKRGKQ
KKVADSSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAKFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaactg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaatgaactg
cgtcaggccgtggacactatcaaggcagatgcttcgatcaagggtgtgatcgtcagcagc
ggcaaggacgtattcatcgtcggtgccgacatcaccgaattcgtcgacaacttcaagctg
cccgatgccgaactgatcgctggcaacctcgaagccaaccgtattttcagcgacttcgaa
gacctcaacgtaccgaccgtcgtggccatcaacggcatcgccctgggtggcggcctggaa
atgtgcctggcggcggattaccgcgtcatgtccaccacggccaagatcggcctgccggaa
gtcaaactgggcatttacccgggcttcggcggaaccgtgcgcctgccgcgcctgatcggt
gccgacaacgccatcgagtggattgccgcgggcaaggaaaaccgtgctgaagacgcgctg
aaagtcggcgccgtggatgccgtggtcgaacctggcaagcttcaggaagcagcccttgaa
accgtcaagcgcgctatcagcggcgagttcgactacaaggccaagcgtcagccgaagctg
gagaagctcaagctcaacgccatcgaacaaatgatggccttcgaaaccgccaagggtttc
gtggccggtcaggcaggcccgaactacccggcaccagtcgaagcgatcaagaccatccag
aaagccgcgagcttcggtcgcgacaaggccctggaagtcgaggccgcaggcttcgtcaaa
ctggccaagacctcggctgcgcaaagcctgatcggtctgttcctcaatgaccaggaactg
aagaaaaaggccaaggcctacgacgaaatcgccagtgatgtgaagcaggctgccgtgctc
ggcgccggcatcatgggtggcggtatcgcctaccagtcggcgtccaagggcacgccgatc
ctgatgaaggacatcaacgaacacgggatcgagcagggtctggccgaagccgccaagctg
ctggtcggccgcgtcgacaaaggtcgcatgaccgctgcgaagatggccgaagtgctcaat
ggcattcgtccgaccctgtcctatggcgatttcggccatgtcgacctggtggtcgaagcc
gttgtcgagaacccgaaggtcaagcaagcggtactggccgaagtcgaagacaaggtcaag
gaggacactatccttgcctcgaacacctcgaccatttccatttcgctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgaacatgcgattgccaccaccgtcgcc
tacgcgaagaaaatgggcaagaacccgatcgtcgtcaacgactgcccgggctttctggtc
aaccgtgtgctgttcccgtacttcggcggtttcgccaagttggtcagcgccggtgtggac
ttcgtgcgcatcgacaagatcatggaaaaattcggctggccgatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgcgacgtcatggctgaaggcttc
ccggatcgcatgaaggacgaccgccgttcggccgtcgacgtgctctacgaggccaagcgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagcgcggcaagcag
aagaaagtcgccgactcgtcggtactggaagtgctcaagccgatcgtctacgagcagcgc
gaagtcaccgacgaggacatcatcaactggatgatgatcccgctgtgcctcgaaaccgtg
cgttgcctggaagacggcattgtcgaaaccgccgccgaagccgacatggggctggtctac
ggtatcggtttccctccattccgtggcggtgcgctgcgctacatcgattcgatcggtgtg
gccaagttcgttgccctggctgaccagtacgctgatctgggcgcgctgtaccacccgact
gcgaagctgcgtgaaatggccaagaacggccagagcttcttcggttaa
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