Pseudomonas bijieensis: GN234_14580
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Entry
GN234_14580 CDS
T07266
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pbz
Pseudomonas bijieensis
Pathway
pbz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GN234_14580 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbz03400
]
GN234_14580 (recB)
Enzymes [BR:
pbz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GN234_14580 (recB)
DNA repair and recombination proteins [BR:
pbz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GN234_14580 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_30
AAA_25
AAA_12
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QKS83100
UniProt:
A0A6N1CFJ9
LinkDB
All DBs
Position
complement(3335770..3339459)
Genome browser
AA seq
1229 aa
AA seq
DB search
MSRQTPLALAFPLRGSQLIEASAGTGKTFTISALYLRLVLGHGGSAAGFGRELLPPQILV
VTFTDAATKELRERIRTRLAEAARYFREEIPAPDSLIAELRDEFDAGQWPGCANRLDIAA
QWMDEAAVSTIHSWCQRMLREHAFDSGSLFTQTLETDHSELLGEVLRDYWRLFCYSMQGE
ALNWVRTHWGGPAALLPRVRGLFSSERGDADELEPAELIAASLQERSAALLDLKAPWRQW
AVELLEICQQGVASKSVDGRKMQARYFEPWFQKITAWVDDESLELLDIGTGFTRLTPEGM
AEAWKGEVPNHPGLDAMAGLKASLEALPTPDAAVLQHAAQWVGARFEAEKRRRAEMGFDD
MLLRLDTALQADGGERLASLIREQFPVALIDEFQDTDPVQYRIFESIYRIEDNDPETGLF
LIGDPKQAIYAFRGADIYTYLRAREATAGRLHTLGRNFRSSHAMVGAVNHIFQNAESRPK
GRGAFLFREPSGENPVPFLSVESQGRKETLQIAGQAVAALNIWHLSSDQPLSGAVYRQSM
AAACASEITTLLNGGQSGRDGFTVDGETLRGLRPADIAILVRDGKEAQAVRDELSARGVR
SVYLSDKDSVFASQEARDLLIWLRACAEPDAERPLRAALASITLNLSLTELERLNQDELA
WEARVMQFRGYRTVWRSQGVLPMLRRLLHDFELPQALMARSDGERVLTNLLHLCELLQQA
AGELDGEQALIRHLSEHLALSGQAGEEQILRLESDEQLVKVVTIHKSKGLEYPLVFLPFI
CSTKPVDGSRLPLHYHDETGKAQISLKPTAELIAKADDERLAEDLRLLYVALTRAQHACW
LGVADLKRGSNNRSILHVSALGYLLGGGAPLAESMELGGWLADLQQGCVAVSCQPMPEAT
DEHYRPPRNEAVLREPLVPLRKASENWWIASYSALRIGESLSEGSDTAPESPQAQKLFDD
ERLDPDAPREALAVGGDIHRFPRGPNPGTFLHGLLEWAAGEGFASEPADIEDAIARRCNR
RGWKGWIPTLSDWLQHLIKMPMHVGNDQAPVVLEQLTRFQVEMEFWFASHKVDVQKLDQL
VCRFTHGGVARVAAEPVLLNGMFKGFIDLTFEHDGRYYVADYKSNWLGVDDMAYTVQAME
QSILDHRYDLQYVLYLLALHRQLKARLPDYDYDRHVGGALYLFLRGTRSTSQGVYFTKPP
RTLIEQLDRLFQGAPEPKAEPAWVQGELL
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgagccggcagacaccattggcactggcgttcccgctacgaggcagccaactgatcgag
gccagcgccgggaccggcaagacctttaccatctcggcgctgtacttgcgactggtactg
gggcatggcggttcggcggccggttttggccgcgagctgcttccaccgcaaatcctggtc
gtgacctttacggacgccgccaccaaagagctgcgtgaacgaattcgcacccgtctggcc
gaagctgcacgttactttcgtgaagaaattccagccccggattcgctgatcgccgagctg
cgtgacgaattcgatgcagggcaatggcccggttgtgcgaatcggttggatatcgccgcg
caatggatggacgaggccgctgtctcgaccatccacagttggtgccagcgcatgttgcgt
gagcatgccttcgacagcggtagcctgttcacccagaccttggaaaccgatcacagcgag
ttactgggcgaggtgttgcgcgattattggcggctgttctgctattcgatgcaaggcgag
gcgctgaactgggtgcgtacccattggggcgggccggcggcgctgttgccacgggtgagg
gggttgttttccagcgagcgtggcgacgctgacgagcttgagcctgccgaactcatcgct
gcctccctgcaggaacgtagtgccgccttgcttgatctcaaggcgccgtggcggcaatgg
gcggtggaactgctggagatctgccagcaaggcgtcgccagcaagtctgtcgatgggcgc
aagatgcaggcgcgttacttcgaaccgtggtttcagaagatcactgcctgggtggatgac
gaaagccttgaactgctggatatcggcaccgggttcacacggctgacccccgagggcatg
gccgaagcctggaaaggtgaagtgcccaatcatcccgggctggacgccatggccggtctc
aaggccagcctggaggcgttgcccacgccggatgccgcggtgttgcagcatgccgcgcaa
tgggtcggggcgcgcttcgaggccgagaaacggcgccgcgccgagatgggcttcgatgac
atgctcctgcgcctcgacacggctctgcaggccgacggtggcgagcgtctggcgagcctg
atccgcgagcagtttccggtggcgctgatcgatgagttccaggacaccgacccggttcag
taccggatcttcgaaagcatctaccgcatcgaagacaatgacccggagaccgggctgttc
ctgatcggcgatccgaagcaggcgatctacgcttttcgcggtgccgacatctacacctac
ctgcgcgctcgcgaagccactgctggcaggctgcatacgctgggcaggaatttccgttcc
agccacgccatggtgggtgcggtaaaccatattttccagaatgccgagtcccgtccaaag
gggcgcggggccttcctgttccgtgaaccttcgggcgagaacccggtgccgttcctgtcc
gttgaatcccaggggcgcaaggagaccttgcagattgcgggacaggcggtggcggcactg
aacatctggcacctgtcgtcggaccagccgctttccggtgcggtgtatcgacagtcgatg
gcggccgcctgcgccagtgagatcacgacgttgctcaacggcggccagtcgggacgcgac
ggctttacggtcgatggagaaacgctgcgaggtttgcgcccggcggatatcgccatcctg
gtgcgcgatggtaaagaagcgcaggccgtgcgagacgagttgtccgcgcggggcgtgcgc
agtgtctatctgtccgacaaggattcggtctttgcctcgcaggaagcgcgggacctgctg
atctggctcagggcctgtgccgagccggatgccgaacgaccgctacgggcagccctggcc
agcatcacgttgaacctctcgctgacggaactggagcgtctcaatcaggatgagctggcc
tgggaagcccgggtcatgcagttccgcggttatcgtacggtctggcgcagccagggcgtg
ctgccgatgttgcggcgtctgctgcatgatttcgaactgccccaggccttgatggcgcgc
agcgatggcgagcgggtgctgaccaacttgctgcacctttgcgaactgttgcagcaggcc
gccggtgaattggatggcgagcaagccttgatccggcatttgtccgagcacctggccttg
tccgggcaggcgggagaagagcagatcctgcgcctggaaagcgacgagcaactggtcaag
gtggtcacgatccacaagtccaaggggcttgagtatccgttggtctttttgcctttcatc
tgttcgacgaaaccggtggacggcagccgattgccgttgcattaccacgatgagaccggc
aaggcgcagatcagtctcaagcccaccgccgaattgatcgccaaggccgatgacgagcgt
ctggccgaggatctgcggcttctctatgtggccctgactcgcgcacagcatgcctgctgg
ctaggtgtcgcggatctcaagcggggcagcaacaaccgctcgatcctgcatgtgtccgcg
ctgggttatctgttgggaggtggtgcgccgttggccgagtcgatggaactggggggttgg
ttggccgacctgcaacaaggttgcgtcgcggtaagttgccagccaatgcccgaagccacc
gacgagcactatcggccgccgcgcaacgaagcagtgttgcgcgagcccttggtgcccttg
cgaaaagccagcgaaaactggtggatcgcctcctacagtgccttgcgcatcggcgaaagc
ctgagcgaaggcagcgataccgcgccagagagtccgcaggcccagaagctgttcgacgat
gaacgactggacccggacgcgcccagggaagccctcgccgtggggggcgacatccatcgc
tttccccgtggtcctaaccccggcactttcctgcatggcttgctggagtgggccgctggg
gagggttttgcatctgagccagcggatatcgaggatgccatcgcccgacgctgtaatcgc
cgaggctggaaaggctggatcccgacgttgagcgactggctgcagcacttgatcaaaatg
cccatgcacgtcggcaacgaccaggcgccagtggtgctcgaacaactgacccgtttccag
gtcgagatggagttctggttcgccagccacaaggtcgatgtgcaaaagctcgatcaactg
gtttgccgattcacccatggcggtgtggctcgcgtcgctgcggaaccggtgttgctcaat
ggcatgttcaagggcttcatcgatttgacgttcgagcacgacggtcggtattacgtggcc
gattacaaatccaactggctgggtgtcgatgacatggcctacaccgtacaggctatggaa
cagtcgatcctggaccaccgctacgacctgcaatacgtgctctacctgttggccctgcat
cgccagctcaaggcgcggcttcccgattacgactacgaccgacatgtcggcggcgcgttg
tacctgttccttcgcggcacccgctcaaccagccagggtgtgtatttcaccaagccgccg
cggacattgattgagcaactggatcggctgttccagggcgcgcccgaacccaaggccgag
ccggcgtgggtacagggggaattgctatga
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