Syntrophotalea carbinolica: Pcar_0831
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Entry
Pcar_0831 CDS
T00285
Name
(GenBank) helix-turn-helix transcriptional regulator, LysR family
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
pca
Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pca03000
]
Pcar_0831
Transcription factors [BR:
pca03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Pcar_0831
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
PBP_like_2
NMT1_3
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
ABA88088
UniProt:
Q3A6B9
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Position
980384..981280
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AA seq
298 aa
AA seq
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MNLKQLEVFIAVAESGSFSRAAEITFLTQSTVSQHVSSLEKEFELKLLDRTGKGAFLTEA
GTLLLDHAQRVVAEAREVPRALSRFRGLEDVTLKIGGSNIPACYMIPQCIFAFRRQHPGV
IITLCQGDSRETLERVKREEVAFALVGTRFADKGLVHTPLVLDKISLVVPAGHPWSKKQH
IRLADLAGEPIIVREPGSGTDRTLREALAKAGFAPDELTPSMCLGSNEAVKQAILNGAGI
SFVSEMSVQKECERGELSMVEVQGLEILRHFYLIARQGRDLAPAAKAFIDCIHQRFRL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaaacagcttgaggtctttatcgctgttgccgagagcggcagtttttcgcga
gccgcggaaatcaccttccttacccagtcgacggtcagtcagcatgtctcgtcgctggaa
aaagagtttgagctgaaattgctcgaccggaccgggaaaggggcgtttctcaccgaagcg
gggacgctgctgctggaccatgctcagcgcgtggttgccgaggccagggaggtgccgcgg
gctttgagccggtttcgcgggcttgaagacgttactttgaaaatcggcggcagcaatatt
cctgcctgttacatgatcccgcagtgcatctttgctttccgcaggcagcatcccggcgtc
attattaccctctgccagggcgacagccgggaaaccctcgagcgggtcaagcgcgaagag
gtggcgtttgccctggtcggaacgcgttttgcggacaaaggccttgtccatacgcctttg
gttttggacaagatatcgctggtggtacccgcaggtcacccctggagcaaaaaacagcat
atccgtctggcggatcttgccggtgagccgatcattgtccgggagcccggttccggtacg
gacaggactttgcgcgaggcccttgccaaggcggggttcgccccggacgagctgaccccc
tccatgtgcctgggcagcaatgaggccgtcaagcaggcgatactcaacggagccggcatc
tcttttgtttccgagatgtcggtgcaaaaagagtgtgagcggggcgagctgtccatggtc
gaggtccaggggctggagatccttcgccatttttacctgatcgcccgccaggggcgcgat
cttgcgccagcggccaaagctttcatcgactgtattcaccaacgttttcgcttgtaa
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