Syntrophotalea carbinolica: Pcar_1708
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Entry
Pcar_1708 CDS
T00285
Symbol
rexA
Name
(GenBank) DNA double-stranded break repair helicase and nuclease AddA
Organism
pca
Syntrophotalea carbinolica
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABA88951
UniProt:
Q3A3V6
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Position
complement(1991676..1995032)
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AA seq
1118 aa
AA seq
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MKLRMTQPPDHDARRQALDPARSFIVQAPAGSGKTELLIQRILALLGGVQQPEEVLAITF
TRKAAGEMRDRLVRALEAARQPEPQAEHARTTWRLARAVLENDARHDWRLLENPVRLAVQ
TIDSFCASLVRRMPWLSRFGAQAAIVEDARELYRQAAERVLKLAEGPDNYGEAACLLLSH
LDNRMERLCELLVGMLARRDQWLRHIYGQQPEQRRQIFEGGLRCLVEGVLDRLYGLLDPE
QKDAMVHLGCFAGSNVQALGIENGIHVLSGLDGFPAASADALPIWRGLAELVLTRSGTVR
KRLDKNCGFPPGKQEPAASMKKEMARLLETLAADEGVLELFAEVRSLPPVVYEPDQWQVL
EALTTLLPRAVAELWLVFKEQGQCDFVEVALAAGRALGEVDAPTDLLLHLDSRIRHILVD
EFQDTSWGQFLLLKKLTAGWQQGDGRSLFLVGDPMQSIYRFREAEVGLYLQARHHGIHQL
RLEALYLSTNFRSQAGVVDWVNRVFPELFPPREDEALGSVTYAASVAARDVLDGPAVTCH
PMAGRDDRAEALQVVDLVRQARRADPEGTVAVLVRARTHLSQILTAFREAGLPFRAQEID
ALADRSVAQDLLALTRALLHPGDRVAWLAVLRAPWCGLSLADLHALCGETPDATLPELLR
QPQRLMRMSADGRMRVERCLGVLNQSLSQRGRVSLRMLVEGAWLALGGPGCLDDAGLVDA
EALFGLLDQLDYGGDMLPMEGLADKLSKLFAAPDPAADDTLQVMTIHKAKGLEFDTVILP
GLGRRPRTEDAPLMRWLELPETGLLLAPLAPLDGQSRDPIYDAIGRVEKQKCDLEIARVL
YVAATRAKKRLHLLGYARPSRDGEFRPSGGSFLEKLWPAVGDRFDGLNPELTDSSDAPKT
VRQMRLLGSDWVLPALPSTSAQSSMEVLSPSSTAHHSQGTTLMPETEDGRHIGTLVHACL
ERIANEGLEHWSIGRVEKERPTLCHRLGRMGVAVDRCMQAADRIVEAVSNTLNSDRGRWI
LGKHEKSACELSLSGVLDGRIIHAEIDRTFVDKEGVRWVVDYKTGDSKGMADDVFFEQQA
HIYKGQLELYARLFQALEPGCHVRTALYFPILDGWFTL
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtatgacacagccccccgatcacgatgcgcgcagacaggcgctcgatcct
gcccggtcctttatcgtgcaagctcctgcaggcagtggtaaaaccgaattgctcatccaa
cgcattctggctttgctgggtggcgtgcaacagcctgaagaggtgctggccattaccttt
acacgcaaagccgccggcgaaatgcgcgatcgcctggttcgggcgcttgaagcggcccgt
caaccggaaccacaggcggagcatgcccgtacgacctggcgcctggccagggcggtgttg
gaaaacgatgcgcgccatgattggcgcctgcttgagaatcccgtgcgcctggcggtgcag
accatcgacagcttttgcgcatctctggtgcggcgcatgccctggttatcccgcttcggt
gcccaggccgcgattgttgaggatgccagggagctctaccgacaggccgctgaaagggtg
ctgaagcttgccgagggccctgacaactatggggaagcggcctgcttgcttctgagtcac
ctcgacaaccgcatggagcggctatgcgaactgctggtcggtatgctggcccggcgcgat
caatggttacggcatatctacgggcagcagcccgaacagcggcggcagatttttgaaggg
ggcttgcgctgtctggtagaaggcgtgctggatcgactgtatggcctgctggatcctgag
cagaaggatgccatggtgcatctgggatgttttgccggttccaacgtacaggccctgggg
atcgaaaacggcatccatgttctgtccggtctggacggttttccagcggcatcggccgat
gccctgccgatctggcgcggtcttgctgaattagtgctgactcgcagcggtacggtgcgc
aagcggctggataaaaattgcggttttcctcccggcaaacaggaaccggcggcctccatg
aaaaaggagatggcgcgcttattggaaacgcttgccgccgatgaaggcgtactggagctt
tttgccgaggtccgctcgctgccgcccgtggtttatgagccggaccaatggcaggttctc
gaggccctgaccaccctgctgccgagggccgtcgccgagttgtggctggtattcaaggaa
caggggcagtgcgactttgtcgaggtggcgctggccgccggcagggcccttggcgaggtt
gatgctcccaccgatctgctgctgcatctcgatagccgaattcgccatatcctggtggac
gagtttcaggatacctcctggggacagttcctgttgctgaaaaaactgaccgccggatgg
caacagggtgacgggcgcagtctgtttctggtcggggatcccatgcagtccatttatcgt
tttcgggaggccgaagtcggactttatctgcaggcacggcatcacggcatccatcagttg
cgactcgaagctctgtacctgagtacgaatttccggtcccaggcgggggtcgtcgattgg
gtcaaccgggttttcccggagttgttcccccctcgtgaggatgaagcactgggcagcgtg
acctatgctgcttcggtggcggcgcgggatgttctggatgggccggccgtgacctgtcat
cctatggcggggcgggatgaccgcgccgaggccttgcaggttgtggacctggtgcgccag
gcgcgccgcgccgatccggagggaaccgttgcggtgctggtgcgtgcgcgcacccatctc
agccagattctcacagcgtttcgggaagccgggttgccgtttcgcgcccaggaaatcgat
gctttggccgatcggtcggtcgcgcaggatttacttgctctgacgcgtgcgttactccat
cctggcgatcgggtggcctggctggctgttctgcgcgcgccatggtgcggattaagtctg
gccgatctgcacgctttgtgcggcgaaactccggatgccaccttgcccgaattgctgcgt
cagccgcagcggcttatgcggatgtcggccgatggccgcatgcgggttgaacgctgcctg
ggggtactgaatcagtctctgtcccagcgcggcagggtatccttgcggatgctggttgaa
ggggcctggctggctcttggcgggcctgggtgtctggatgatgccggtctggtcgatgcc
gaagcgttgttcggtctgctggatcagcttgattacggcggggatatgctgcctatggag
ggtctggccgataagctatccaagctgtttgccgctcccgatcccgctgctgacgatact
ctccaggtcatgactatccataaggccaaaggccttgagttcgacaccgttatcctgccg
ggtctgggccgccgacctcgcaccgaagacgcccctctgatgcgctggctcgaactgccg
gagacggggttgttgttggcgcccctggctccattggatggccagagccgcgatcctatt
tacgatgcgatcgggcgtgttgaaaaacagaaatgcgacctggaaatcgcccgggtcctc
tatgtggcggcaacccgcgccaaaaagcggttgcatttgctgggctatgccaggccctcc
agggacggggagtttcgtccgtctggcggttcttttctggaaaaactctggccggccgta
ggcgaccgtttcgatggtttgaatcctgagctcacggattcgtccgatgccccgaaaacc
gtcaggcagatgcggctgctcggttccgactgggttttacccgcactgccttcgacatcc
gcacaaagttccatggaggtgctgagcccttcttcgacagcccatcactctcaggggacg
acgctcatgccggaaacggaagatggtcgccatatcggcactctggtgcatgcctgtctg
gagcgtatcgccaatgaaggccttgagcattggtcgattggtcgtgttgaaaaggaacgg
ccgacgctgtgtcatcgtcttggccgtatgggagtggcggttgatcgctgtatgcaggcg
gcggatcgcatcgttgaggcggtgtccaataccttgaacagtgatcgagggcggtggatt
ctcggaaaacatgaaaaatccgcctgcgagctttctctgtccggggtgctggacggccgt
attatccatgccgaaatcgatcgcacgtttgttgataaagagggggtgcgctgggttgtc
gactataaaaccggcgacagcaagggcatggcggatgacgtgttttttgaacagcaagct
catatttataaaggccagttggaactttatgcccgcctgtttcaggccttggagccagga
tgccatgttcgcacggccttgtattttcccattctggacggttggtttactctgtga
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