Pseudomonas cannabina pv. alisalensis: JGS08_10450
Help
Entry
JGS08_10450 CDS
T07379
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00071
Fatty acid degradation
pcab00280
Valine, leucine and isoleucine degradation
pcab00310
Lysine degradation
pcab00362
Benzoate degradation
pcab00380
Tryptophan metabolism
pcab00410
beta-Alanine metabolism
pcab00640
Propanoate metabolism
pcab00650
Butanoate metabolism
pcab00907
Pinene, camphor and geraniol degradation
pcab00930
Caprolactam degradation
pcab01100
Metabolic pathways
pcab01110
Biosynthesis of secondary metabolites
pcab01120
Microbial metabolism in diverse environments
pcab01200
Carbon metabolism
pcab01212
Fatty acid metabolism
Module
pcab_M00087
beta-Oxidation
pcab_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JGS08_10450 (fadB)
00650 Butanoate metabolism
JGS08_10450 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
JGS08_10450 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JGS08_10450 (fadB)
00310 Lysine degradation
JGS08_10450 (fadB)
00380 Tryptophan metabolism
JGS08_10450 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
JGS08_10450 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JGS08_10450 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JGS08_10450 (fadB)
00930 Caprolactam degradation
JGS08_10450 (fadB)
Enzymes [BR:
pcab01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
JGS08_10450 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
JGS08_10450 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
JGS08_10450 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
JGS08_10450 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QQN23991
LinkDB
All DBs
Position
2291942..2294107
Genome browser
AA seq
721 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS
GKDSFIVGADITEFVDNFKLPEAELVAGNLEANKIFSDFEDLGVPTVVAINGIALGGGLE
MCLAADYRVISSSARIGLPEVKLGLYPGFGGTVRLPRIIGADNAIEWIASGKENAAEDAL
KVGVVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTSAAHSLIGLFLNDQEL
KKKAKGYDEVARDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGTVDLVVEAVVENPKVKQAVLAEVEANVG
ENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEEAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEANRLGQKNGKGFYAYETDKKGKP
KKVNDPAVLEVLKPIVHEQREVSDEDIVNWMMIPLCLETVRCLEDGIVDTAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADQYAELGALYQPTAKLREMARNGQSFFGQASSE
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaagttcaaccgcctcaccctcaatgaactg
cgccaggcggtggatgccatcaaggcagacgcatcggtcaagggcgtcattgtcagcagt
ggcaaggattcgttcattgtcggcgccgacatcaccgagtttgtcgacaacttcaagttg
ccggaagccgaactggtggcgggcaatcttgaagccaacaaaatcttcagcgatttcgaa
gatctgggcgtgcctaccgtcgtcgccatcaacggcatcgcgctgggtggcggcctggaa
atgtgcctggccgcggattaccgcgtcatctccagcagcgcccgtatcggcctgcccgaa
gtcaaactgggtctgtacccgggtttcggtggcaccgtgcgtctgccgcgcatcatcggc
gctgacaatgcaatcgaatggattgcatcaggcaaggaaaacgccgcagaagacgcgctt
aaagtcggtgttgtcgatgccgtagtcgcccccgaaaaactccaggccgccgcactcgac
ctgatccagcgcgcgatttccggcgagttcgattacaaggccaaacgccagccgaaactg
gacaagctcaaactgaacgccatcgagcagatgatggccttcgaaaccgccaagggtttt
gtcgcaggtcaagccgggccgaattatccggcgccggtcgaagccatcaagaccatccag
aaagccgccaacttcggtcgtgacaaggcgctggaaatcgaagccgccggcttcgtgaaa
atggccaagacctccgcagcccacagcctgatcggcctgtttctgaacgatcaggagctg
aaaaagaaagccaagggctacgacgaagttgcccgcgacgtgaagcaggctgccgtgctg
ggcgccgggatcatgggcggcggcattgcctatcagtcggctgtcaaaggcacgccgatc
ctgatgaaggacatccgcgaagaagccattcagttgggcctgaacgaagcctccaaactg
ttgggtggccgactggaaaaaggtcgtctgacggctgcgaaaatggctgaagcgctgaat
gcgattcgtcctacgctgtcctacggcgatttcggcacggtcgatctggtggtcgaagcg
gtagtcgagaacccgaaggtcaagcaggctgtgctggctgaagtcgaagccaacgtgggt
gaaaacaccatcctcgcgtccaacacctcgaccatctccatcagcttgctggcgcaggcg
ctcaagcgtccggaaaacttcgtcggcatgcactttttcaacccggtgcacatgatgccg
ctggttgaagtcatccgaggcgaaaaatccagcgaagaagcggtcgcgacgaccgttgcc
tatgccaagaagatgggcaagaacccgattgtagtcaatgactgcccaggctttctggtt
aaccgcgtgctgttcccgtacttcggcggtttcgccagactggtcagcgcaggtgtggat
ttcgtgcgcatcgacaaggtcatggaaaaattcggctggccgatggggcctgcctatttg
atggacgttgtcggtatcgacaccggccaccatggtcgtgacgtaatggccgaaggcttc
ccggaccgtatgaaggacgaccgccgctcggccatcgatgcgctttacgaagccaatcgt
ctgggtcagaaaaacggtaagggtttctacgcctacgaaacagacaagaagggcaagccg
aagaaggtcaacgatccggctgtgctggaagtgctcaagccgattgtccacgaacagcgt
gaggtgtctgatgaagacatcgtcaactggatgatgatcccgctctgcctggaaacggtc
cgttgcctggaagacggcatcgtcgacacggctgccgaggccgacatgggcctgatttac
ggtattggtttccctccattccgtggcggtgcgctgcgctacatcgactcgatcggtgtg
gccgaattcgttgccctggctgaccaatacgccgagctgggtgccctgtatcaaccgacc
gcgaagctgcgtgaaatggcccgcaatggccagagcttcttcggtcaagcgtcttccgag
gtatga
DBGET
integrated database retrieval system
