KEGG   Pseudomonas cannabina pv. alisalensis: JGS08_10670
Entry
JGS08_10670       CDS       T07379                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
pcab  Pseudomonas cannabina pv. alisalensis
Pathway
pcab03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pcab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    JGS08_10670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcab03400]
    JGS08_10670
DNA repair and recombination proteins [BR:pcab03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     JGS08_10670
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: QQN24034
LinkDB
Position
2342432..2343343
AA seq 303 aa
MARAIWKGAISFGLVHIPVALVSATTSNSVDFDWLDKRSMDPVGYKRINKVTGKEVTKEN
IVKGVLHEKDRYVVLSEEEIRSSHPKSTQTIDIFAFVDSQQIPLQNIDTPYFLTPDKRGE
KVYALLRETLIDTKKVALANVVLHTREHLAAVMPLESALVMVILRWPADVRELDALELSE
AVTKAQLNKSERDMAKRLVKDMSADWEPEKYRDTFQEKIMKLVETKASEGKIEDVETDPG
EEERKSADVIDLTDLLRRSLAGKSGAGKARASKPAAKATDKAAAKDETKPKRPAARKKTG
KAS
NT seq 912 nt   +upstreamnt  +downstreamnt
atggcaagggcaatctggaagggcgcgatcagcttcgggctggtacacatccccgtcgcg
ctggtgtctgcgacaacgtcgaacagtgtcgatttcgactggctggacaagcgcagcatg
gacccggtcggctacaaacggatcaacaaggtcaccggcaaggaagtcaccaaggaaaac
atcgtcaaaggcgtgttgcacgagaaggatcgttatgtggtgctcagcgaggaggaaata
cgttcttcgcaccccaagtcgacccagaccatcgatatcttcgccttcgtcgacagccaa
cagattccgttgcagaacatcgacacgccgtattttctgaccccggacaagcgcggcgaa
aaggtctacgcgctgctgcgcgaaactctgatcgataccaaaaaggtggcgctggccaac
gtcgtgttgcacacccgcgagcatctggcggcggtcatgccgctggagtcggcgctggtg
atggtgatcctgcgctggcccgccgacgtccgcgaactcgatgcgctggaactgagtgag
gccgtcaccaaggcgcaattgaataaaagcgaacgcgacatggccaagcggctggtcaag
gacatgagtgccgactgggagcctgaaaagtaccgcgatacgtttcaggagaagatcatg
aaactggtcgaaaccaaggccagcgaaggcaagatcgaagacgtcgaaaccgatccgggc
gaggaagaacgcaagagcgccgatgtcatcgacctcaccgatttgctgcgtcgcagcctg
gcgggcaaaagcggtgcgggcaaggcgagggcaagcaaacccgccgccaaggccaccgac
aaggctgctgccaaagacgagaccaagcccaagcggcccgctgcgcgtaaaaagaccggc
aaagcgtcttga

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