KEGG   Pseudomonas cannabina pv. alisalensis: JGS08_20065
Entry
JGS08_20065       CDS       T07379                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pcab  Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:pcab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcab03400]
    JGS08_20065
Enzymes [BR:pcab01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     JGS08_20065
    5.6.2.6  RNA 3'-5' helicase
     JGS08_20065
DNA repair and recombination proteins [BR:pcab03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    JGS08_20065
SSDB
Motif
Pfam: Lhr_WH DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: QQN20883
LinkDB
Position
4498679..4501171
AA seq 830 aa
MSRPTDFARRWFLARGWKPFAFQKDVWAAVKKGESGLLHASTGSGKTYAVWFAALNQFAK
ANTLTADDKPRKRKPPAAPLSVMWITPMRALAADTARALEAPLGELDIPWSVGLRTGDTS
SSERARQGRRLPSALITTPESLTLLLTRADAQVALSTLKMVVVDEWHELIGNKRGVQLQL
ALARLRRWNPQLIVWGISATLGNQQHAQQVLIGDGGVTVQGKIVKQLQVDTLLPPSIERF
PWAGHMGLRMLPQVVAEVNSSASCLVFTNTRAQSEIWYQALLEARPDWAGLIALHHGSLA
REVRDWVERALKEGSLKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLMQRAGRSGHAP
GRPSRVTLVPTHSLELVEAAAAHDAVAARMIEPRESPHQPLDVLVQHLVSMALGGGFLPD
ELVTEVRSAWAYRELSDEQWQWALAFVRNGGHSLTAYPDYRRAEPDEHGVWRVPDARLAR
RHRMSVGTIVSEATVNLKYWKKGGGGGSLGSVEEGFIARLKPGDGFLFGGRLLELVRVEN
MTAYVKRATGKKAAVPRWNGGRMPLSSELADAVVEKFDAAARGEFNSPEMQAIKPLLEVQ
QQWSGLPQRDTLLAETLKSREGWHLFLYPFAGRHVHLGLGSLLAWRLSRDRPLTFSIAVN
DYGLELLSASEINWTDALNAELFSETDLLADIMASLNAGELALRRFREIARISGLVFSGY
PGAAKSNRQLQASSGLFFEVFKQYDAENMLLTQAQEEVLRQELDLQRLELTLRQINNRRL
DLHTIKRATPLAFPLLVERFRESLSSEKLSDRIARMVRDLEKAAGPEHER
NT seq 2493 nt   +upstreamnt  +downstreamnt
atgagcagacccaccgatttcgctcgacgatggtttctcgcccgaggctggaagccgttc
gcgtttcaaaaggacgtctgggcggcggtaaaaaagggcgagtctggcctcctgcacgcc
agcaccggttcgggcaagacctacgccgtgtggttcgccgccctcaatcaattcgccaaa
gccaatacgctgactgccgacgacaaaccccgcaaacgcaaaccacccgctgcgccgctg
agtgtcatgtggatcacgcccatgcgcgccctggccgccgacaccgctcgcgccctcgaa
gcaccgctgggtgagctggatattccgtggtcggtggggttgcgcaccggcgacaccagc
agcagcgagcgcgcccgtcaggggcgtcggctgccgtccgccctgattaccacacctgaa
agcctgacgctgttgttgacccgtgccgacgcgcaggttgccttgtcgacgctgaagatg
gtcgtggtggacgaatggcacgaactgatcggcaacaagcgtggcgtacagttacaactg
gcgctggcccgtctgcgccggtggaatccgcaactgatcgtgtggggcatctctgcaaca
ctcggcaatcaacagcacgcgcaacaggtgctgattggcgacggcggcgtgaccgtgcag
ggcaagatcgtcaagcagctgcaggttgatacgctcctcccgccatccatcgaacgcttt
ccgtgggccgggcacatgggcttgcgcatgttgccgcaggtcgtcgcagaggtgaacagc
agcgccagttgcctggtgttcaccaacacgcgcgcgcagtcggaaatctggtatcaggcg
ctgctcgaagcgcgcccggactgggctggcctgattgcgctgcaccatggttcgctggcc
cgcgaggtgcgcgactgggttgaacgcgcgctcaaagagggatcgctcaaggccgtggta
tgcacctccagcctcgacctgggcgtggattttctgccggtcgagcgcgtactgcaaatt
ggctcacccaaaggcgttgcacgcctcatgcaacgcgccggtcgttcgggccatgcgcca
ggccgtccttcccgcgtcacgctggtgccgacccacagcctggaactggtagaagccgcc
gcggcgcatgatgcggtggccgcgcgcatgatcgagccacgcgaatcaccgcaccagccg
ctggacgtgctggtccagcacttggtcagcatggcgctgggtggtggttttctgcccgac
gagctggtgactgaagtgcgcagcgcctgggcctaccgtgagctcagcgacgaacagtgg
caatgggcactggcgtttgtgcgtaacggcggccactcgctgaccgcctaccccgattac
aggcgggcagagcccgacgaacacggcgtgtggcgagtgcccgacgcgcgtctggcccgt
cgccaccggatgagcgtcggcaccattgtcagcgaagctacggtcaatctgaaatactgg
aaaaaaggcggtggaggcggctcgctgggcagcgtcgaagaaggctttatcgcccggctc
aagcccggcgacggctttctgttcggtgggcgtttgctggagctggtccgggtcgagaac
atgaccgcctacgtgaaacgcgcgaccggcaagaaagccgccgtgccgcgctggaatggc
gggcggatgccactgtccagcgagctggcggacgcggtggtggaaaaattcgatgctgcc
gcccgtggcgaattcaacagcccggaaatgcaggccatcaagcccttgctggaagttcag
caacaatggtccggcctaccgcaacgcgatacattgctggccgaaacactcaagtcccgc
gagggctggcatctgtttctctacccgttcgccgggcgtcatgtgcacttggggctgggc
agcttgctggcctggcgcctgagccgtgaccggccgctgacgttctcgattgcggtcaac
gattatggcctggagctgctcagcgccagcgaaatcaattggaccgacgctttgaacgcc
gaactgtttagcgaaaccgatctgctcgccgacatcatggccagcctcaacgcaggcgaa
ctggcgctgcgacgctttcgggaaatcgcccgcatctccgggctggtattttccggttac
cccggcgcggcgaagagcaaccgtcagcttcaagcatcgagcggactgtttttcgaggtt
ttcaaacagtacgacgccgagaacatgctgttgacccaggcacaggaggaagtgttgcgc
caggaactcgacctgcaacgtcttgagctgacgctgcggcagatcaacaaccgaaggctg
gacctgcacacgataaaacgtgcgaccccactggcgtttccgttactggtagagcgcttt
cgtgaaagcctcagctccgagaaactgtctgaccgtatcgcccgcatggtccgcgatctc
gagaaagccgcaggcccggagcatgaacgatga

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