Pectobacterium cacticida: OI450_16615
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Entry
OI450_16615 CDS
T08693
Symbol
hupA
Name
(GenBank) DNA-binding protein HU-alpha
KO
K05787
DNA-binding protein HU-alpha
Organism
pcac
Pectobacterium cacticida
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcac03032
]
OI450_16615 (hupA)
03036 Chromosome and associated proteins [BR:
pcac03036
]
OI450_16615 (hupA)
03400 DNA repair and recombination proteins [BR:
pcac03400
]
OI450_16615 (hupA)
DNA replication proteins [BR:
pcac03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OI450_16615 (hupA)
Chromosome and associated proteins [BR:
pcac03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
OI450_16615 (hupA)
DNA repair and recombination proteins [BR:
pcac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
OI450_16615 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
VWA_3
Motif
Other DBs
NCBI-ProteinID:
UYX06503
LinkDB
All DBs
Position
complement(3650642..3650914)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTQLIDVIADKADLSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRNERTG
RNPQTGKEIKIAAANVPAFVSGKALKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataagactcaactgattgatgtaattgcggacaaagctgatctgtcaaaaactcag
gctaaagcagccttggaatcaacgctggcggcaattaccgagtctctgaaagaaggtgat
gcagtacaattagttggttttggtacgtttaaggtcaaccatcgcaatgagcgcacgggc
cgcaatccacaaaccggtaaagaaatcaaaattgctgctgccaatgtgccagcgtttgtg
tctggtaaagcgttgaaagacgctgttaaataa
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