Physeter catodon (sperm whale): 102976836
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Entry
102976836 CDS
T06011
Symbol
DDX49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49 isoform X2
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
pcad
Physeter catodon (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcad03009
]
102976836 (DDX49)
Enzymes [BR:
pcad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102976836 (DDX49)
Ribosome biogenesis [BR:
pcad03009
]
Eukaryotic type
90S particles
Helicases
102976836 (DDX49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_22
DUF3888
Motif
Other DBs
NCBI-GeneID:
102976836
NCBI-ProteinID:
XP_007117006
Ensembl:
ENSPCTG00005019293
UniProt:
A0A2Y9F842
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MGLAVRMAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTA
AFVLPILQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQA
LELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILA
AVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVKDAY
LVHLIQNFQDDHEDWSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKF
KSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQ
YDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAANFDEKKEINKRK
QMILEGKDPDLEAKRKAELAKIKQKNRRFKEKVEQALQRQKASGSGHRGCPSGAQPEACL
SPAPAQGPA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgggactggctgtgaggatggctggcttcgcggagcttgggctgtcatcctggctcgtg
gaacaatgccggcagctgggtttgaagcagcccacgcccgtgcagctcggctgcattccc
gccatcctggaaggtagggactgcctgggctgtgccaagacaggcagtggcaagacggca
gcgtttgtcctgcccatcttgcagaagctgtctgaggatccctatggcatcttctgcctc
gtcctgacacccaccagggagctggcctaccagatcgcagagcagttccgggtcctgggg
aagcctctgggcttgaaagactgcatcattgtcggcggcatggacatggtggcccaggcc
ttggagctctcccggaaaccacatgtggtcatcgccacaccagggcgcctggctgaccac
ctccgcagctccaataccttcagcataaagaagattcgcttcctggtgatggatgaggca
gaccggctgttggagcagggctgcactgacttcaccgtggacctggaggccatcctggca
gctgtaccggcccgcaggcagacgctgctcttcagtgccacgctgaccgacacgctgagg
gagctgcagggcctggccaccaaccagcccttcttctgggaggctcaggcccctgtgcgc
acagtagaacagctggaccagcgctacctgctagtgcctgagaaggtcaaggatgcctac
ctggtccacctgatccagaacttccaggacgaccacgaggactggtccatcatcatcttc
accaacacatgcaagacctgccagattctgtgcatgatgctgcgcaaattcaacttcccc
accgtggctctgcattccatgatgaaacagaaagaacgctttgccgccctggccaagttc
aagtccagcatctaccggatcctgatcgcgacggatgtggcctcccggggcctggacatt
cccacggtgcaggtggtcatcaaccacaacacccccgggctcccgaagatctacatccac
cgagtcggccggacagcccgtgcagggcggcagggacaggccatcacgctggtgacacag
tatgacatccacctggtacacgccatcgaggagcagatcaagaagaagctggaggagttc
tcggtggaggaagctgaggtgctacagatcctcacacaggtcaacgtggtgcggagggag
tgtgagattaaactggaggcagccaactttgatgaaaagaaagagattaataagcggaag
cagatgatcctggaggggaaggatcccgacctggaggccaagcgcaaggccgagctggcc
aaaatcaagcagaagaaccggcgcttcaaggagaaagtggagcaggcactgcagcggcag
aaggccagcgggtctggccacagggggtgtccatccggggcccagcctgaggcctgcttg
tccccagcacccgctcagggcccggcctga
DBGET
integrated database retrieval system
