Physeter catodon (sperm whale): 102977579
Help
Entry
102977579 CDS
T06011
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X2
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad04622
RIG-I-like receptor signaling pathway
pcad05161
Hepatitis B
pcad05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
102977579 (DDX3X)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
102977579 (DDX3X)
09172 Infectious disease: viral
05161 Hepatitis B
102977579 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102977579 (DDX3X)
03041 Spliceosome [BR:
pcad03041
]
102977579 (DDX3X)
03036 Chromosome and associated proteins [BR:
pcad03036
]
102977579 (DDX3X)
Enzymes [BR:
pcad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102977579 (DDX3X)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102977579 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
102977579 (DDX3X)
Spliceosome [BR:
pcad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102977579 (DDX3X)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102977579 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
Motif
Other DBs
NCBI-GeneID:
102977579
NCBI-ProteinID:
XP_007120931
Ensembl:
ENSPCTG00005019909
UniProt:
A0A2Y9FEA2
LinkDB
All DBs
Position
21:24219760..24235883
Genome browser
AA seq
661 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGW
SSSKDKDAYSSFGCRSDSRGKSSFFSDRGSGSRGRFDDRGRSDYDSIGSRGERGGFGKYE
RGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIE
SFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS
QIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV
YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ
IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV
WVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR
EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL
ATSFFNERNVNITKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSRFSGGFGARD
YRQSSGASSSSFSSSRASSSRSGGGGHGSSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWG
N
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgcgctcgggctggaccagcagtttgctggcctagac
ctgaactcttctgataatcagagtggaggaagtaccgccagcaaagggcgctatattcct
cctcacttaaggaacagagaagctactaaaggattctatgataaagacagttcagggtgg
agttctagtaaagataaggatgcatacagcagttttggttgccgtagtgattcaagagga
aagtctagtttcttcagtgatcgtggaagtggatcaaggggaaggtttgatgatcgtgga
cgaagtgactatgacagcattggcagccgtggtgaaagaggtggctttggaaaatatgaa
cgtggtggaaatagtcgctggtgtgacaaatcagatgaagatgattggtcaaaaccactc
ccgccaagtgaacgcttggaacaagaacttttttctggaggcaacaccgggattaacttt
gaaaaatacgatgacattccagttgaggcaacaggcaacaactgtcctccacacattgaa
agtttcagtgatgttgagatgggagaaattattatgggaaacattgagcttactcgctac
actcgtccgactccagtgcaaaagcatgctattcctattatcaaagagaagagagacttg
atggcttgtgcccaaacagggtctggaaaaactgcagcatttctcttgcccatcttgagt
cagatttattctgatggtccaggcgaggctttgagggccatgaaggaaaatggaaggtat
gggcgccgcaaacaatacccaatctccttggtgttagcaccaactagagaattggctgta
cagatctatgaggaagccaggaaattttcataccgatctagagttcgtccttgtgtggtt
tatggtggtgctgatattggtcagcaaattcgagacttagaacgtggatgccacttgtta
gtagccactccaggacgtctagtggatatgatggaaagagggaagattggattagacttc
tgcaaatacttggtgttagatgaagctgatcggatgttggatatggggtttgagcctcaa
atacgtagaatcgttgaacaagatactatgccaccaaagggagttcgccacactatgatg
tttagtgctactttcccgaaggaaatacagatgcttgctcgtgatttcttggatgaatat
atctttctggccgtaggaagagttggctctacctctgagaacatcacacagaaagtagtc
tgggtggaagagtcagacaaacggtcatttctacttgaccttctaaatgcaacaggcaaa
gattcactgaccttagtgtttgtggagaccaaaaagggtgcagattctctagaggatttc
ttgtaccatgaaggatatgcctgtacgagtatccatggagaccgatctcagagagataga
gaagaggctcttcaccagttccgctcaggaaaaagcccgattctagtggctacagcagta
gcagcaagaggactggacatttcaaatgtgaaacatgttatcaattttgacttgcccagt
gatatcgaagaatatgtacatcgtattggccgtacaggacgtgtaggaaaccttggcctt
gccacctcattctttaatgagaggaacgtaaatattaccaaggatttgttggatcttctt
gttgaagctaaacaagaagtgccatcttggttagaaaacatggcttatgaacaccactac
aagggtagcagtcgtggacgatccaaaagtagattcagtggaggatttggtgccagagac
tatcgacagagtagtggtgccagcagttccagcttcagcagcagccgcgccagcagcagc
cgcagtggtggaggcggccatggcagcagcagagggtttggtggaggtggctatggaggc
ttttacaacagtgatggatatggaggaaattataactcccagggggttgactggtggggt
aactga
DBGET
integrated database retrieval system
