Physeter catodon (sperm whale): 102980588
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Entry
102980588 CDS
T06011
Symbol
MNAT1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1 isoform X2
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad03022
Basal transcription factors
pcad03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102980588 (MNAT1)
09124 Replication and repair
03420 Nucleotide excision repair
102980588 (MNAT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcad03021
]
102980588 (MNAT1)
03400 DNA repair and recombination proteins [BR:
pcad03400
]
102980588 (MNAT1)
Transcription machinery [BR:
pcad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102980588 (MNAT1)
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102980588 (MNAT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_2
TRAF3_RING
zf-UDP
DZR_2
DNA_ligase_ZBD
zinc-ribbons_6
zf-P11
LMBR1
zf-RING_4
Poty_PP
DUF1272
Motif
Other DBs
NCBI-GeneID:
102980588
NCBI-ProteinID:
XP_023988816
Ensembl:
ENSPCTG00005007267
UniProt:
A0A2Y9TD00
LinkDB
All DBs
Position
11:complement(142287717..142511132)
Genome browser
AA seq
309 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFRV
QLFEDPTVDKEVEIRKKVLKIYNKREEDFPSLREYNDFLEEVEEIVFNLTNNVDLDNTKK
KMEIYQKENKDVIQKNKLKLTREQEELEEALEVERQENEQRRLFIQKEEQLQQILKRKNK
QAFLDELESSDLPVALLLAQHKDRSTQLEMQLEKPKPIKPVTFSTGIKMGQHITLPPIQK
LEEALYEYQPLQIETCGPQVPELEMLGRLGYLNHVRAASPQDLAGGYTSSLACHRALQDA
FSGLFWQSS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcagggctgtccccggtgtaagaccaccaaataccggaacccttcgttgaag
ctgatggtgaatgtgtgcggacacactctgtgtgaaagttgcgtggatttactctttgtg
agaggagctggaaactgtcctgagtgtggcactccacttaggaagagcaacttcagggta
caactctttgaagatcctactgttgacaaggaagttgagattcggaaaaaagtgctaaag
atatacaataaaagggaagaagactttcctagcctaagagaatataatgatttcctggaa
gaagtggaagaaattgttttcaacttgaccaacaatgtggatttggacaacaccaaaaag
aaaatggagatataccaaaaggaaaacaaagatgtcattcagaaaaataagttaaagctg
actcgggaacaggaggaattggaagaagctttagaggtagaacgacaggaaaatgaacaa
agaagactatttatacaaaaagaagaacaactgcagcagattctaaaaaggaagaataag
caggcttttttagatgaactggagagttctgatctccctgttgctctacttttggctcag
cataaagatagatctacccaactggaaatgcaacttgagaaacctaaacctataaaacca
gtgacattttccacaggcatcaaaatgggtcaacatattacattaccacccattcaaaaa
cttgaagaagctctatatgaataccagccactacaaatagagacttgtgggccacaagtt
cctgagcttgagatgctaggaagacttgggtatttaaaccatgtcagagctgcctctcca
caggaccttgctggaggctatacttcttctctggcgtgtcacagagcactacaggatgca
ttcagtgggcttttctggcagtccagttaa
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