Physeter catodon (sperm whale): 102980927
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Entry
102980927 CDS
T06011
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
pcad
Physeter catodon (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcad03041
]
102980927 (DDX17)
Enzymes [BR:
pcad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102980927 (DDX17)
Spliceosome [BR:
pcad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102980927 (DDX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
102980927
NCBI-ProteinID:
XP_007111783
Ensembl:
ENSPCTG00005007944
UniProt:
A0A2Y9EYY9
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Position
6:complement(44007154..44023787)
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AA seq
652 aa
AA seq
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MRGGGFGDRDRDRDRGGFGARGGGGLPPKKFGNPGERLRKKKWDLSELPKFEKNFYVEHP
EVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQC
QGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQ
VQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRC
TYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINV
GNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR
RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSS
EDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGG
GGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRGETDRAGYANGS
GYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSGYTAQEYGAGTYGASSTTSTGRSSQSSSQ
QFSGMGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPPSRK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggaggcggctttggggaccgggaccgggatcgtgaccgtggaggatttggagca
agaggtggtggtggccttcccccgaagaagtttggtaatcctggggagcgtttacgtaaa
aagaagtgggatttgagtgagctccccaagtttgagaagaatttttatgttgaacatcca
gaagtggcaaggctgactccgtatgaggttgatgaactacgccgaaagaaagagattaca
gtgagaggaggcgatgtttgtcctaaacctgtgtttgccttccatcatgctaacttccca
caatacgtaatggatgtgttgatggatcagcacttcacagaaccaactccaattcagtgc
cagggatttcccttggctcttagtggccgggatatggtgggcattgctcagactggctct
gggaagacattggcgtatttgctgcctgctatcgttcatattaaccaccagccttacttg
gaaagaggagatggcccaatttgtctagttctggctcctaccagagagcttgcccagcag
gtacagcaggtggctgatgactatggcaaatgttctagattgaagagcacttgcatttat
ggaggtgctcctaaaggtccccagattcgagacttggagagaggtgtcgagatctgtata
gctactcctggacgcctgatagatttcctggagtcaggaaagacaaatcttcgccgatgt
acttaccttgtactggatgaggctgacagaatgcttgatatgggctttgaaccccaaatt
cgtaaaattgttgaccaaatcaggcctgataggcagacattaatgtggagtgcaacctgg
ccaaaagaagtaagacagcttgcagaggatttccttcgtgattacacccagatcaacgta
ggcaatctggagttgagtgccaaccacaacatcctccagattgtggatgtctgcatggaa
agtgaaaaagaccacaagttgatccaactcatggaggaaataatggctgaaaaggaaaat
aagacaataatatttgtagagacgaaaagacgctgtgatgacctcactcgaaggatgcgc
agagatggttggccagctatgtgtatccatggagacaagagtcaaccagaaagagattgg
gtacttaatgagttccgttctggaaaggctcccattctcattgccacagatgtagcctcc
cgtgggctagatgtggaagatgtcaagtttgtgatcaactatgactatccaaacagctca
gaggattatgtgcaccgtattggccgaacagcccgtagcaccaacaagggcaccgcctat
accttcttcaccccagggaacctaaagcaggccagagagttgatcaaagtgctggaagag
gctaatcaggctatcaatccaaaactgatgcagctggtggaccacagaggaggcggcgga
ggagggggtaagggaggtcgttctcgataccggaccacttcttcagccaacaatcccaat
ctgatgtatcaggatgagtgtgaccggaggcttcgaggggtcaaagatggtggccggaga
gactctgcgagctatcgggatcgtggtgaaaccgatagagccggttatgctaacggtagt
ggctatggaagtccaaattctgcctttggagcacaagcaggccaatacacctatggtcaa
ggcacctatggggcagctgcttatggcaccagtggttacacagcccaagaatacggtgct
ggcacttatggggccagtagcaccacctcaactgggagaagttcacagagctctagccag
cagtttagtgggatgggccggtctgggcagcagccacagccactgatgtcacaacagttt
gcacagcctccgggagctaccaatatgataggttacatggggcagactgcctaccagtac
ccaccccctcctcctccccctcctccttcacgtaaatga
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