Physeter catodon (sperm whale): 102984328
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Entry
102984328 CDS
T06011
Symbol
SEC24B
Name
(RefSeq) protein transport protein Sec24B isoform X1
KO
K14007
protein transport protein SEC24
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102984328 (SEC24B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102984328 (SEC24B)
Membrane trafficking [BR:
pcad04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
102984328 (SEC24B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
102984328
NCBI-ProteinID:
XP_023975092
Ensembl:
ENSPCTG00005002490
UniProt:
A0A2Y9SCM5
LinkDB
All DBs
Position
7:114411013..114512580
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AA seq
1257 aa
AA seq
DB search
MSAPSGSPHPAASSRIPPKLGGAAASGAAAPAGPGPGPHQQNGPAQNQMQVPSGCGFHPQ
SYIAASGHYSQGPGKMTSLPLDSQCDDYYSGLYRAPTQNVVTANTARPQPGAQQMYGSLP
PASHGPGSTLGSFQGAGSSASHLRTSASQPFSSFVNHYNSPATYSDNSSVAAQGFPSTCG
HYALSTVSNAAYPSVSYPSLPAGDPYGQQMFTSQNAPTVRPIRDNSFSGQNTAISHPSPL
PPPPSQQYHQQQSLSGYNTFAWSASGLPSTQDNLIQNHTSLATANNPANPVADTLSCSVM
QNVQPPKSSPVVSAVLSGASSTRTPPAASRPVEPLASVTRPSELLQQKGMQYGEYVNNQA
SSAPTPLSSTSDDEEEEEEDEEAGVDSSSTTSSASPMPNSYDALEGGSYPDMLSSSASSP
APDPAPDPDPDPDPAPAAPQPSKLAKPFGYGYPALQPGYQNATAPLNSGAPPSSPVYSGF
QQYAQQYPGMNQLSSSLGGLSLQSSSQPESLRPVNLTQERNILPMTPVWAPVPNLNLDLK
KLNCSPDSFRCTLTNIPQTQALLNKAKLPLGLLLHPFRDLTQLPVITSNTIVRCRSCRTY
INPFVSFIDQRRWKCNLCYRVNDVPEEFMYNPLTRSYGEPHKRPEVQNSTVEFIASSDYM
LRPPQPAVYLFVLDVSHNAVEAGYLTILCHSLLENLDKLPGDSRTRIGFMTFDSTIHFYN
LQEGLSQPQMLIVSDIDDVFLPTPDSLLVNLYESKELIKDLLNALPNMFTNTRETHSALG
PALQAAFKLMSPTGGRVSVFQTQLSSLGAGLLQSREDPNQRSSTKVVQHLGPATDFYKKL
ALDCSGQQTAVDLFLLSSQYSDLASLACMSKYSAGCIYYYPSFHYTHNPSQAEKLQKDLK
RYLTRKIGFEAVMRIRCTKGLSMHTFHGNFFVRSTDLLSLANINPDAGFAVQLSIEESLT
DTSLVCFQTALLYTSSKGERRIRVHTLCLPVVSSLADVYAGADVQASICLLANMAVDRSI
SSSLSDARDALVNAVVDSLSAYGSTVSNLQHSGLIAPSSLKLFPLYVLALLKQKAFRTGT
STRLDDRVYAMCQIKCQPLVHLMKMIHPNLYRIDRLTDEGAVHVNDRVVPQPPLQKLSAE
KLTRDGAFLMDCGSVFYIWIGKSCDSNFIEDVLGYPNFASIPQKMTHLPELDTLSSERAR
SFITWLRDNRPLNPILHVVKDESPAKTEFFQHLIEDRTEAAFSYYEFLLHVQQQICK
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccccctccgggtcacctcatccggccgccagctctcggatcccgcccaagctt
ggcggagccgccgcctcaggagccgccgcgcccgcgggcccgggcccggggcctcaccag
cagaacggtccggcacagaatcaaatgcaagttccatctgggtgtggatttcatcctcaa
agctacattgctgcctcaggacattattctcaaggacctgggaaaatgacctcattgcca
ttggatagccagtgtgatgattactactctggtctctatagggcaccaacacaaaatgtg
gtgactgctaacacagcacgcccacagccaggagcacagcagatgtatggcagccttcct
cccgcctctcacggcccgggatccactctgggatcattccaaggcgccgggtcgtcagca
tcacatctgcgtacgagcgcctcccagccattctcctctttcgtgaatcattacaatagt
ccagccacgtactctgacaattcttctgttgctgctcagggatttccctctacttgcggt
cactatgctttgtcaactgtttctaatgctgcgtatcctagtgtttcatatccctctcta
cctgccggtgatccatatgggcagcagatgtttacctcacagaatgctccaactgtcagg
ccaattagagataattcattttctggtcaaaatacagctatcagccatccatcaccactt
ccacctccaccatcacaacagtaccaccagcagcagagtctttcaggatacaatactttc
gcatggtcagcttcaggccttccgtcaacccaagacaatctaatccaaaaccacacctcc
ctggctacagccaacaacccagcaaatcctgttgcagatactttgtcctgttctgtaatg
caaaatgttcagcctcccaagtccagcccagtagtatccgctgtcttgtcaggagcctcg
tcaacaagaacgcctcctgctgcaagtcgcccagttgagcctttggcttcagttacacgg
ccgtcagagctattacagcagaaaggcatgcagtatggtgaatatgttaataatcaagct
agctccgcaccaactcccttgtcatccacttccgatgatgaggaagaggaggaggaggat
gaggaagcaggtgttgacagctcttctaccacaagcagtgcttctccaatgcccaacagt
tatgatgccctagaaggaggcagctatccagacatgctctcctcatcagcaagcagtccc
gctcctgatcccgctcccgaccccgaccccgaccctgaccctgctccagctgctcctcag
ccttcaaaactggctaagccatttgggtatggttatccagctcttcagcctggatatcag
aatgctacagcaccactgaattctggagcaccgcccagtagcccagtgtattctgggttc
cagcagtatgctcagcagtatcctggtatgaaccagttgtcctccagtctgggaggattg
agtcttcagagttcttcacaaccagaaagtttgagacctgtaaaccttactcaggagaga
aatattttacccatgactcctgtttgggctcctgtacctaacttgaatttagacctcaaa
aaattaaactgtagcccagattcatttcggtgtactttgacgaatattccacagacacag
gctttactgaataaagctaagcttcctttaggattgttgttacatcccttcagagactta
acgcaattaccagtgataacatccaataccattgtgaggtgccggtcttgtcgaacatat
atcaacccttttgtatccttcattgatcaacgtagatggaaatgcaatttgtgctataga
gttaatgatgttcctgaagaatttatgtataatccccttacccgatcttatggagagcct
cataaacggccagaagttcagaattcaaccgtggagttcattgcttcttcagattatatg
cttcgtccacctcaaccagcagtttacttgtttgttttagatgtgtctcataatgcagtg
gaagctggatatttgacaattttgtgccactcactgttagaaaatctagacaagcttcct
ggagattcacgaacaagaataggattcatgacctttgatagcactattcatttctacaat
ttacaagaaggattatcgcagcctcagatgttgattgtgtctgatatagatgatgttttt
ctacctacaccggatagcttacttgtgaatctgtatgaaagtaaagagcttataaaagac
ttattgaatgcattaccaaatatgttcaccaatacaagagaaacacacagtgccctgggt
cctgcgctccaggctgcctttaaattaatgtctccaacaggtggccgtgtgtctgtattt
cagacacagttatcttccttgggggcaggacttctgcagtccagagaagatcctaatcag
agatcaagcacaaaggttgtacagcatcttggccctgcaactgatttttataagaaactt
gctttagattgctcagggcagcagactgcagtggatctgttccttttaagttcacagtac
tctgatcttgcttctctagcttgcatgtccaagtattctgcagggtgcatctattattac
ccatctttccactatactcacaatccttcacaagcagaaaagttacaaaaagatctaaaa
cggtatctcacaagaaaaattggatttgaagctgttatgagaataaggtgcactaaaggt
ctttccatgcacacttttcatggaaacttctttgtccgttccactgatttgttatccctc
gccaacatcaatcctgatgctggatttgcagtacagctgtcaattgaagaaagtttgacg
gatacttccttagtgtgctttcagacagccctgttatatacatcaagcaagggtgagcgg
agaattagagtgcacacactttgcttgccagtggtcagttcgctagcagatgtatatgca
ggagctgatgtacaagcttccatctgcctcctggcaaacatggctgtggatcgatcaatt
tcatcaagtttatcagatgcaagagatgccttagtgaacgctgtggtggattcattatct
gcatatggctcaactgtctcaaatttacagcactctgggttgatagcacccagctccctc
aagttgtttcctctctatgttttggcccttctcaaacagaaagcatttagaactggtaca
agcacacgcctggatgatcgtgtatatgccatgtgtcagataaagtgtcagccacttgtt
catctaatgaaaatgattcatcccaacctatacaggatagacagactgacagatgagggt
gcagtacacgttaatgacagggtggtacctcagccacctcttcaaaaattgtctgcagag
aaactgacacgagacggtgctttccttatggactgtggctctgttttttacatttggatt
ggaaaaagctgtgacagtaactttatagaggatgtgctcgggtatccgaattttgcatca
ataccacagaaaatgacacatcttccagagctagacaccctttcatcagaaagagctaga
tcctttataacctggcttagagacaacagaccattaaacccaattcttcacgtggtaaaa
gatgagagtcctgccaaaacagaattttttcaacatttgattgaagaccggacagaagct
gcattctcttattatgaatttttgcttcacgttcagcagcagatttgtaagtga
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integrated database retrieval system
