Physeter catodon (sperm whale): 102994805
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Entry
102994805 CDS
T06011
Symbol
TNC
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad04151
PI3K-Akt signaling pathway
pcad04510
Focal adhesion
pcad04512
ECM-receptor interaction
pcad05165
Human papillomavirus infection
pcad05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102994805 (TNC)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102994805 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102994805 (TNC)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
102994805 (TNC)
09172 Infectious disease: viral
05165 Human papillomavirus infection
102994805 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pcad00536
]
102994805 (TNC)
Glycosaminoglycan binding proteins [BR:
pcad00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102994805 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_2
EGF_Tenascin
Pur_ac_phosph_N
Interfer-bind
DUF4998
fn3_2
NDNF
TauD
hEGF
Motif
Other DBs
NCBI-GeneID:
102994805
NCBI-ProteinID:
XP_023981948
Ensembl:
ENSPCTG00005019759
UniProt:
A0A2Y9SUT5
LinkDB
All DBs
Position
9:10623806..10719515
Genome browser
AA seq
1655 aa
AA seq
DB search
MGVATRLLAGIFLSLLALPAEGGVLKKVIRHKRQSGVNVTLPEENQPVVFNHVYNIKLPV
GSQCSVDLESASREKDLVPLSEPRESFQEHTVDGENQIVFTHRINIPRRACGCVAAPDVK
ELLSRLEELENLVSSLREQCTLGAGCCFQPAEGRLDTKPFCSGRGNFSTEGCGCVCEPGW
KGPNCSEPECPGSCHLRGQCLDGQCMCDKGFTGEDCGQLACPSDCNDQGKCMNGTCVCFE
GYSGVDCSQEPCPVPCSEEHGRCVDGRCVCRDGFAGEDCNEPLCLHNCRGRGRCVENECV
CDEGFTGDDCGELICPNDCFDRGRCVNGTCYCDEGFTGEDCGQLACPHACHGRGRCDEGQ
CVCDEGFAGADCSEKRCPSDCHDRGRCLDGHCECDDGFTGADCGELRCPRDCSGHGRCVN
GQCVCDEGHTAEDCGQLRCPHDCHGRGRCVQGRCECELGFQGYDCGEMSCPHDCHQHGRC
VNGMCVCDDAYMGEDCRELRCPRDCSQRGRCVDGRCVCEDGFAGPDCADLSCPGDCYGRG
RCVDGQCVCHEGFTGKDCGQRRCPDDCHGQGRCVDGRCVCHEGFTGLDCGQRSCPNDCSN
WGQCVSGRCICNEGYTGEDCSQVSPPKDLIVTEVTEETINLAWENEMRVTEYLIVYTPTH
EDGLEMQFRVPGNQTSTTIQELEPGVEYLIRVFAILENKKSIPVSARVATYLPTPEGLKF
KSIRETSVEVEWDPVDIAFETWEVIFRNMNKEDEEEITKSLRRPETTYRQTGLAPGQEYE
ISLHIVKNNTRGPGLKRVTTTRLDAPSQIEVKDVTDTTALITWSKPLAEIDSIELTYGIK
DVPGDRTSIDLTHEENQYSIGNLKPDTEYEVSLISHRADMSSNPARETFTTGLDAPRNLR
RISQTDNSITLEWRNVKAAADSYRIKYAPISGGDHAEVEVPRRQQTTTRTTLTGLRPGTE
YGVGVSAVKGDKESDPATINAATDLDAPKDLRVSELTETSVTLIWQTPLAKYDRYRLNYS
LPSGQPVEVQLPRGTTSYVLKGLEPGQAYTILLTAEKGRHKSKPARVQASTEAEPEVDNL
LVSDATPDGFRLSWTADEGVFDSFVLKIRDTKKQSEPLEITLLDPERTRDITGLREATEY
EIELYGISSGRRSQPVSAIATTAMGSPKEIVFSDITENSATVSWKAPTTQVESFRVTSVP
TAGGTPSVVTVDGAETQTRLLRLLPGVEYLVSVIALKGFEESKPVSGMLTTALDGPSGLV
TANITDSEALAMWQPAIAPVDNYVISYTGGREPEITRTVSGNTVEYALTNLEPATEYTLR
ISAEKGPQKSSTITTKFTTDLDSPRDFTATEVQSETAVLTWRPPRASVTGYLLVYESVDG
TTKEVVVDPDTTSYSLAGLSPSTHYMAKIQALNGPLRSKIIRTTFTTTGVLYPFPRDCSQ
AMLNGDTTSGVYPIYLNNDKTQKQEVFCDMTSDGGGWVVFLRRKNGREDFYRNWKAYAAG
FGDLKEEFWLGLDTLNKITAQGQYELRVDLRDHGQSAYAVYDKFSVGDARTRYRLKVEGY
SGTAGDSMAYHNGRSFSTFDKDTDSAITNCALSYKGAFWYKNCHRVNLMGRYGDNNHSQG
VNWFHWKGHEYSIQFAEMKLRPSSFRNLEGRRKRA
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atgggggtcgcgactcggctgttggcaggcatcttcctatctctgcttgcccttccggcc
gaaggtggcgtcctcaagaaagtcatccggcacaagcgacagagtggggtgaatgtcacc
ctgccagaggagaaccagccggtggtgtttaatcatgtctacaacatcaagctgcctgtg
gggtcccagtgctcggtggatctggaatcagccagcagggagaaagacttggtcccactg
tcagagcccagggaaagcttccaggagcacacggtagacggggaaaaccagatcgtcttc
acacaccgcatcaacatcccccgccgggcctgtggttgtgtcgccgctcctgatgtcaag
gagcttctgagcagactggaggagctagagaacctggtgtcttccctgcgggagcagtgc
accttgggagcaggctgctgcttccagcctgccgaaggccgcctggacaccaagcccttc
tgcagcggccggggcaacttcagcacggaaggctgtggctgtgtgtgtgaaccgggctgg
aaaggccccaactgctctgagcctgaatgtccaggcagctgtcacctgcgaggccagtgc
ctggacgggcagtgcatgtgtgacaagggcttcacaggggaggactgtggccagctggcc
tgtcccagcgactgcaatgaccagggcaagtgcatgaacgggacctgcgtctgcttcgaa
ggctactcgggggtggactgcagccaggagccctgcccggtgccctgcagcgaggagcac
ggccgctgcgtggacggccgctgtgtgtgccgggacggcttcgccggcgaggactgcaac
gagcccctgtgtctgcacaactgccgcggccgcgggcgctgcgtggagaacgagtgcgtg
tgcgatgagggcttcacgggcgacgactgcggcgagctcatctgccccaacgactgcttc
gaccgcggccgctgcgtcaacggcacctgctactgcgacgagggcttcacgggtgaggac
tgcggccagctcgcctgcccccacgcctgccacggccgcggccgctgcgacgagggccag
tgcgtgtgcgacgagggcttcgcgggtgcggactgcagcgagaagcgctgtccctctgac
tgccacgaccgcggccgctgcctggacgggcactgcgagtgcgatgacggcttcacgggc
gcggactgcggcgagctccggtgcccccgcgactgcagcggccacggccgctgcgtcaac
gggcagtgcgtgtgcgacgagggtcacaccgcggaggactgcgggcagctgcggtgcccc
catgactgtcacggccgcgggcgctgcgtgcaggggcggtgcgagtgcgaactcggcttc
cagggctatgactgtggcgagatgagctgcccccatgactgtcaccagcacggccgctgc
gtgaacggcatgtgtgtctgtgacgacgcctacatgggcgaggactgccgggagctgcgc
tgcccccgggactgcagccagcggggccgctgcgtggacgggcggtgcgtgtgcgaggac
ggcttcgccggccccgactgcgcagacctctcctgtcccggcgactgctacggccggggc
cgctgcgtggacggccagtgcgtgtgccacgagggcttcacgggcaaggactgcgggcag
cgcaggtgtcccgacgactgtcacggccagggccgctgcgtggacggccggtgcgtgtgc
cacgagggcttcactgggctggactgcgggcagcgctcctgccccaacgactgcagcaac
tgggggcagtgcgtctccggccgctgcatctgcaatgagggctacaccggagaagactgc
tcccaagtgtcccctcccaaagacctcatcgtgacagaagtgacagaagagaccataaac
ctggcctgggaaaatgagatgcgggtcacagagtacctcatcgtgtacacgcccactcac
gaagacggcctagaaatgcagttccgcgtccctggaaaccagacgtccaccaccatccag
gagttggagcctggcgtggagtacctcatccgcgtgttcgccatcctggagaacaagaag
agcattcctgtcagcgccagggtggccacttacctgcctacacctgaaggtctaaaattc
aagtccatcagggagacatctgtggaagtggagtgggatcctgtggacatcgcttttgaa
acgtgggaggtcatcttccggaatatgaataaagaagatgaggaagagatcaccaaaagc
ctgcggaggccagagaccacgtaccggcaaactggcctagctccggggcaagagtatgag
atatctctgcacatcgtgaaaaacaatacccggggcccaggcctgaagagggtgacaacg
acccgcttggacgcccccagccagatcgaagtgaaagacgttacggacaccaccgctctg
atcacctggtccaagcccctggccgagatcgacagcattgagctcacatacgggatcaaa
gatgtgccaggcgaccgaaccagcatcgacctcacacacgaggagaaccagtactccatc
gggaacctgaagccagacaccgagtacgaggtttccctcatctcccacagggccgacatg
tctagcaaccccgccagagagaccttcacaacaggcctggatgcgcccagaaatctccgc
cgcatctcccagacagacaacagcatcaccctggagtggaggaacgtcaaggcggccgcc
gacagttacagaattaagtacgcacccatctctggaggtgaccatgctgaggtagaagtc
cccaggaggcaacaaaccacgaccagaactacactcacaggtctgaggccaggaactgaa
tatggcgttggagtgtctgccgtgaagggggacaaggagagcgacccagccaccatcaat
gcggccacagacctggacgcgcccaaggacctacgggtttctgaacttacggagaccagc
gtgaccctgatctggcagacgccgctggccaagtatgaccgttaccgcttaaactacagt
cttccctcgggccagccggtggaggtgcagctccccagaggcaccacctcctacgtcctg
aaaggcctggaacctgggcaggcatacaccatcctcctcacggcagagaagggcaggcac
aagagcaagccggcacgggtacaggcatccacagaagccgagccagaagttgacaacctt
ctggtttcagatgccaccccagacggtttccgtctgtcctggacagctgatgagggggtc
ttcgacagctttgttctcaaaatcagagataccaaaaagcagtctgaaccactggaaata
accctgcttgaccccgaacgtaccagggacataacaggtctcagagaggccactgaatac
gaaattgaactctatggaataagcagtggaaggcgatcccagccagtcagtgctatagcc
acaacagccatgggctccccgaaggaaatcgttttctcagacatcactgaaaactcagcc
actgtcagctggaaggcacccactacccaggtggagagcttccgggttacctctgtaccc
actgcaggaggtacaccctcagtggtaactgtggatggggccgagactcagaccaggctg
ctgagactcttacctggagtggagtacctcgtcagcgtcatcgccctgaagggctttgaa
gaaagcaagcctgtctcggggatgctcaccacagctctggatggcccatctggcctggtg
acagccaacatcaccgactcagaagccttggccatgtggcagccggccatcgcccccgtg
gacaattatgtcatctcctacacaggggggagagagccagaaattacccgcacggtgtcc
gggaacacggtggagtatgcgctgaccaacctcgagcctgccacggaatacacgctgagg
atctcggcggagaaagggccccagaagagctcaactatcaccaccaagttcacgacagac
ctcgattctccaagagacttcactgctactgaggttcagtcggaaactgccgttctcacg
tggagacctccccgggcatctgtcactggttacctattggtgtatgaatccgtggacggt
acaaccaaggaggttgttgtggatccagacaccacctcttatagcctggcagggctgagc
ccatccacccactacatggccaagatccaggcactgaatgggcccctgagaagcaagatc
atcaggaccaccttcaccacaactggagtcctgtacccattccccagggactgctcccaa
gccatgctgaatggagacacgacctctggcgtctaccccatttatctgaacaacgacaag
acccagaagcaggaagtcttctgtgacatgacctctgacgggggtggatgggtcgtgttc
ctgagacgcaaaaatggacgtgaggatttctatcgaaactggaaggcctacgctgctgga
tttggggacctaaaagaagaattctggcttgggctggacaccctgaacaaaatcacagcc
caaggtcagtacgagctccgggtggacctgcgggaccacgggcagtcagcctacgccgtc
tacgacaagttcagcgtgggagacgcccggactcgctaccggctgaaggtggaggggtac
agcgggacagcaggtgactccatggcctaccacaacggcagatccttctccacctttgac
aaggacacagactcggccatcaccaactgtgccctgtcctacaagggggctttctggtac
aagaactgccaccgcgtcaacctgatggggagatacggggacaataaccacagtcagggt
gttaactggttccactggaagggccacgagtattcaatccagtttgctgagatgaagctg
agacccagcagcttccgaaacctcgaaggcaggcgcaagcgggcataa
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integrated database retrieval system
