Paraburkholderia caffeinilytica: DSC91_001518
Help
Entry
DSC91_001518 CDS
T06448
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf00260
Glycine, serine and threonine metabolism
pcaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DSC91_001518
Enzymes [BR:
pcaf01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
DSC91_001518
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
DSC91_001518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
NAD_binding_8
Pyr_redox_3
DAO
HI0933_like
FAD_binding_2
Pyr_redox
NAD_binding_7
GIDA
FAD_binding_3
AlaDh_PNT_C
XdhC_C
Thi4
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AXL49632
LinkDB
All DBs
Position
1:complement(1628014..1631016)
Genome browser
AA seq
1000 aa
AA seq
DB search
MSQKDRLPSGGRINRAIVLNFTFNGRKYQGYQGDTLASALLANGEHFVARSWKYHRPRGI
VTAGVEEPNAVVQLETGAYTVPNARATEVELYQGLVATSVNAKPSIEKDRMAINQKFARF
IPAGFYYKTFMWPRKFWPKYEEVIRDAAGLGKAPEQTDADRYDKCFAHCDVLVVGGGPTG
LAAAHAAALSGARVTLIDDQPELGGSLLSCRAEIDGKPALQWVHKIEDELRQMPDVKILC
RSTAFGYQDHNLVTVTQRLTEHLPVSQRKGTRELMWKIRAKRVILATGAHERPIVFGNND
LPGVMLASAVSTYLHRYAVLPGRNAVVFTNNDDGYQCALDLKAAGAQVTVVDPRAGESKG
TLPALARRYGVKVMNGVVVTAAQGKLRVASVDVASYSNGQVGAKQGALPCDLLAMSGGWS
PVLHLFAQSGGKAHWHDDKACFVPGKAMQAETSVGACAGDFTLGQGIRFAIDAGVEAARA
AGHIVARPNPVQVAEITEAKMQPLWLVGGRELATRGPKQFVDFQNDVSAADIFLAAREGF
ESVEHVKRYTAMGFGTDQGKLGNINGMAILAQALGKTIPETGTTTFRPNYTPVTFGTFAG
RELGEFLDPVRKTAVHEWHVENGAAFEDVGNWKRPWYFAKPGEDMHAAVARESLAVRTSV
GILDASTLGKIDIQGPDAAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMIFDDGVTVRLA
DQHYMMTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVC
HDIDFANAAFPFMSYREGTVAGAASRVMRISFSGELAYEVNVPANVGRAVWEALMAAGAE
FDITPYGTETMHVLRAEKGYIIVGQDTDGSMTPYDLGMGGLVAKSKDFLGKRSLTRSDTA
KAGRKQLVGLLADDPSFVIPEGSQIVAGPFQGDTAPMLGHVTSSYYSPILKRSIAMAVVK
GGLDKIGETVTIPLASGKQIAAKVTSSVFYDSEGARQHVE
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagaccgactccccagcggcgggcgcatcaaccgcgcgatcgtactgaac
ttcacgttcaacgggcgcaagtatcagggctatcagggcgacacgctggcgtccgcgctg
ctcgcgaacggtgagcacttcgtggcgcgcagctggaagtaccatcggccgcgcggcatc
gtgacggcgggtgtggaagagccgaatgcggtcgtgcagctcgaaaccggcgcatacacg
gtgcccaacgcacgcgcgaccgaagtggagttgtatcaggggctcgtcgcgaccagcgtc
aacgcgaagccgagcatcgaaaaagaccgcatggcgatcaatcagaagttcgcgcgcttc
attccggcgggcttctactacaagaccttcatgtggccgcgcaagttctggccgaagtat
gaagaagtgatccgcgacgcggccggtctcggcaaggcgcccgagcaaaccgatgcggac
cgctacgacaagtgctttgcgcattgcgacgtgctggtggtcggcggcggcccgacgggt
ctggcggcggcacatgcggcggcattgtccggcgcacgcgtgacgctgatcgacgatcag
ccggaactcggcggctcgctgctgtcgtgccgcgcggagatcgacggcaagccggcgctg
caatgggttcacaagatcgaggacgaactgcggcagatgccggacgtgaagatcctgtgc
cgcagcaccgcattcggttaccaggaccataacctcgtcaccgtcacgcagcggctcacc
gagcatctgccggtgtcgcagcgaaagggcacgcgcgaactgatgtggaagatccgcgcg
aaacgcgtgattctcgccaccggcgcgcatgagcggccgatcgtgttcggcaacaacgat
ctgcccggcgtgatgctggcttcggctgtgtcgacctatctgcatcgctatgcggtgctg
ccgggccgcaatgccgtggtgttcacgaacaacgacgacggttatcaatgcgcgctcgat
ctgaaagcggccggcgcccaggtgacggtcgtcgatccgcgcgccggcgaatcgaagggc
acgctgcccgcgctggcacggcgctacggcgtcaaggtgatgaacggcgtggtcgtgacc
gcggcacagggcaagctgcgggtcgcctcggtcgatgtagcgtcgtattcgaacggacag
gtcggtgcgaagcagggcgcgctgccttgcgatctgctcgcgatgtccggcggctggagt
ccggtgctgcacctgttcgcgcagtcgggcggcaaggcgcattggcatgacgacaaggcc
tgcttcgtgccgggcaaggcgatgcaggcggagacgagcgttggcgcgtgcgccggcgat
ttcacgctgggccaggggattcgctttgcgatcgacgccggcgtcgaggcggcgcgtgca
gcgggccatatcgttgcgcggccgaatccggtgcaggtggccgagattaccgaagcgaag
atgcaaccgctgtggctcgtcggcggacgcgaactcgcgacgcgcgggccgaagcagttc
gtcgacttccagaacgacgtgtcggcggccgatattttcctcgcggcgcgcgaaggtttc
gaatcggtcgagcacgtgaagcgctataccgcgatgggcttcggcaccgatcagggcaag
ctcggcaacatcaacggcatggcgattctggcgcaagcgctcggtaagacgattcccgag
accggtaccacgaccttccgtccgaactacacgccggttacgttcggcacgtttgcgggc
cgcgaactcggcgagtttctcgatccggtgcgcaagaccgcggtgcacgaatggcacgtg
gaaaacggcgctgcgttcgaggacgtcggcaactggaagcgtccgtggtacttcgcgaag
cccggcgaggacatgcatgcggcagtggcgcgtgaatcgctggcggtacgcacgagcgtc
ggtattctcgatgcctcgacgctcggcaagatcgacattcagggtcccgatgcggcgaag
ctgctgaactgggtctacacgaatccgtggagcaaactggaagtcggcaagtgccgctac
ggcctgatgctcgacgaaaacggcatgatcttcgacgacggcgtgaccgtgcgtctcgcc
gaccagcactacatgatgaccaccaccacaggcggcgcggcacgcgtgctcacgtggctc
gaacgctggctgcagaccgagtggccggacatgcgcgtgcgcctcgcgtccgtcacggat
cattgggcgacgtttgccgtggtcgggccgaacagccgcaaggttctgcagaaagtctgc
cacgacatcgacttcgcaaatgcagccttcccgttcatgagctatcgcgaaggcactgtg
gcgggggcggcatcgcgcgtgatgcggatcagcttctccggcgaactcgcgtatgaagtg
aacgtcccggcgaacgtcggccgtgcggtatgggaagcgctgatggccgcgggcgcggaa
ttcgacatcacgccgtatggcacggaaaccatgcacgtgctgcgtgccgagaagggctac
atcatcgtcggtcaggatacagacggttcgatgacgccgtacgatctcggcatgggcggg
ctggtcgcgaagtcgaaagactttctcggcaagcgttcgttgacgcggtcggacaccgcg
aaggcggggcgcaagcaactggtcgggctgctcgcggacgatccgtcgttcgtgatcccc
gaaggctcgcaaatcgtcgccggtccgttccagggcgataccgcaccgatgctcggccac
gtcacgtcgagctattacagcccgatcctgaagcgctcgattgcgatggcggtggtgaag
ggcggtctcgacaagatcggcgaaacggtcacgattccgctcgcgagcggcaagcagatt
gctgcaaaggtcaccagctcggtgttctacgacagcgaaggagcacgtcaacatgtggaa
tga
DBGET
integrated database retrieval system
