Paraburkholderia caffeinilytica: DSC91_004648
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Entry
DSC91_004648 CDS
T06448
Name
(GenBank) LacI family transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf02010
ABC transporters
pcaf02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DSC91_004648
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
DSC91_004648
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcaf02000
]
DSC91_004648
Transporters [BR:
pcaf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
DSC91_004648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
SBP_bac_11
Glyco_hydro_3_C
ADH_zinc_N
RNase_P_p30
Adhesin_P1_N
Motif
Other DBs
NCBI-ProteinID:
AXL51842
LinkDB
All DBs
Position
2:complement(1398072..1399040)
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AA seq
322 aa
AA seq
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MTETTMTQSTSKQTSLTTFARSTALWATLAFGLSFIAAPAAQAAPLKIGMTFQELNNPYF
VTMQKALNDAAASIGATVVVTDAHHDVSKQVSDVEDMLQKKIDILLVNPTDSTGIQSAVT
SAKKAGVVVVAVDANANGPVDSFVGSKNFDAGEMACDYLAKSIGGSGEVAILDGIPVVPI
LERVRGCKAALAKVPGIKLVDTQNGKQERATALSVTENMIQAHPNLKGVFSVNDGGSMGA
LSAIESSGKDIRLTSVDGAPEAIAAIQKPNSKFIETSAQFPADQVRIAFGVALARKWGAN
VPKAIPVDVKMIDKSNAKGFSW
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgacggagacaaccatgacgcaatccacctcgaagcagacatccttgacgaccttcgcg
cgcagcaccgctctttgggcaacgctcgcgttcggcctgtcgttcatcgccgcaccggcg
gcacaggccgcgccgttgaagatcggcatgacgtttcaggaactgaacaacccgtacttc
gtgacgatgcaaaaagcgctgaacgacgcggctgcgtcgattggcgcgacggtcgtcgtg
acagacgcgcatcatgacgtcagcaagcaggtgagcgacgtcgaagacatgctgcaaaag
aagatcgacatcctgctcgtgaatccgaccgattcgaccggcattcaatcggccgtgacg
tcggccaagaaagcgggcgtggtagtggtcgccgtcgatgcgaacgcgaacggtccggtc
gattcgttcgttggctccaagaatttcgacgcgggtgagatggcttgcgactacctggcg
aagtcgatcggcgggagcggcgaagtggcgattctcgacggcattccggtggtgccgatt
ctcgaacgcgtgcgcggctgcaaggcggcgctggcgaaagtgccgggcatcaaactcgtg
gacacgcagaacggcaagcaggaacgcgcgacggcattgtccgtcaccgagaacatgatt
caggcgcatccgaatctgaagggcgtgttcagtgtgaacgacggcggctcgatgggcgcg
ctttcggcgatcgaatcgtcgggcaaggacatcaggctgaccagcgtcgacggtgcgccg
gaagcgattgccgcgatccagaagccgaattcgaagttcatcgaaacgtccgcgcaattt
ccggccgaccaggtgcgtatcgcgttcggcgttgcgctggccaggaagtggggcgccaat
gtgccgaaagcgattccggtcgacgtgaagatgatcgacaagagcaatgccaagggtttc
agctggtaa
DBGET
integrated database retrieval system
