Parageobacillus caldoxylosilyticus: BV455_01669
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Entry
BV455_01669 CDS
T07489
Symbol
sigH
Name
(GenBank) RNA polymerase sigma-H factor
KO
K27000
RNA polymerase sigma-H factor
Organism
pcal
Parageobacillus caldoxylosilyticus
Brite
KEGG Orthology (KO) [BR:
pcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcal03021
]
BV455_01669 (sigH)
Transcription machinery [BR:
pcal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BV455_01669 (sigH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
HTH_23
HTH_38
Sigma70_ECF
HTH_28
UPF0122
Sigma70_r4
HTH_16
HTH_29
DUF1676
HTH_30
HTH_Tnp_Tc3_1
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
QXJ38350
LinkDB
All DBs
Position
complement(1606392..1607042)
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AA seq
216 aa
AA seq
DB search
MGQCFKEKMYSDYKNMEDERLVELVHQGDGDALDFLIHKYQNFVRAKARSYFLVGADRED
IVQEGMIGLYKAVRDFKGDKLSSFKAFAELCITRQMITAIKTATRQKHIPLNSYVSLDKP
IYDDESDRTLMDVISGTRATDPEELIVNREKVDDIEVKMAELLSDLERKVLALYLDGRSY
QEISEELNRHVKSIDNALQRVKRKLEKYLEYREISL
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
gtgggtcaatgcttcaaggaaaaaatgtacagtgattacaaaaacatggaagatgaacgg
ttagtagagttggtacatcaaggggatggggatgcgctagattttttaattcataaatac
caaaatttcgtacgtgctaaagcccgctcttattttttagtcggcgctgatcgggaagat
attgttcaagaagggatgatcggcctgtacaaggcggttcgcgattttaagggggacaag
ctctcctcttttaaagcgtttgcagaactttgcatcacaaggcagatgattacggctatt
aaaacggcaacaaggcaaaaacatattccgttgaattcatacgtttccttagataagcct
atctatgatgatgaatcagacaggacgttgatggatgtcatttccggcacaagagcgacg
gatccggaagagcttattgttaatcgcgaaaaagtagacgatattgaggtcaaaatggca
gaacttcttagcgatttagagagaaaagtgcttgctttgtatttagatggacgttcgtac
caagaaatttctgaagaattgaaccgccatgtcaaatcgattgataacgctcttcagcgt
gtaaaaagaaagctggaaaaatatttggagtaccgcgaaatcagcctttaa
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