Pseudomonas campi: HNE05_05530
Help
Entry
HNE05_05530 CDS
T07561
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pcam
Pseudomonas campi
Pathway
pcam00071
Fatty acid degradation
pcam00280
Valine, leucine and isoleucine degradation
pcam00310
Lysine degradation
pcam00362
Benzoate degradation
pcam00380
Tryptophan metabolism
pcam00410
beta-Alanine metabolism
pcam00640
Propanoate metabolism
pcam00650
Butanoate metabolism
pcam00907
Pinene, camphor and geraniol degradation
pcam00930
Caprolactam degradation
pcam01100
Metabolic pathways
pcam01110
Biosynthesis of secondary metabolites
pcam01120
Microbial metabolism in diverse environments
pcam01200
Carbon metabolism
pcam01212
Fatty acid metabolism
Module
pcam_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pcam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HNE05_05530 (fadB)
00650 Butanoate metabolism
HNE05_05530 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HNE05_05530 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HNE05_05530 (fadB)
00310 Lysine degradation
HNE05_05530 (fadB)
00380 Tryptophan metabolism
HNE05_05530 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HNE05_05530 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HNE05_05530 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HNE05_05530 (fadB)
00930 Caprolactam degradation
HNE05_05530 (fadB)
Enzymes [BR:
pcam01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HNE05_05530 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HNE05_05530 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HNE05_05530 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HNE05_05530 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QKE62839
UniProt:
A0A6M8FFV0
LinkDB
All DBs
Position
1712933..1715080
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLSELRQSVDAIKADGSIKGVIVTS
GKDVFIVGADITEFVDNFKLPDEELVAGNLEANKIFSDFEDLNVPTVVAINGIALGGGFE
MCLAADYRVAAETAKVGLPEVKLGIYPGFGGTVRLPRVIGTDNAIEWIASSKEAKAADAL
KVGAVDAVVAPAKLQEAALDLVKRAISGELDYKAKRQPKLEKIKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSVAESLIGLFLNDQEL
KKKAKQHDEIARDVKLAAVLGAGIMGGGIAYQSASKGTPILMKDIREEGIQMGLAEASKL
LGNRVAKGRMTPAKMAEALTGIRPTMSYGDFGNVDIVVEAVVENPKVKQIVLAEVEGVVR
EDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDVAVATTVA
YAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFSKLLAFGVDFVRIDKVMEKFGWPMGPAYL
SDVVGIDTGHHGRDVMAEGFPDRMAVEGRTAVDVMYEADRLGQKNGKGFYSYEMDKRGKP
KKVSDPVAYDLLKSIVTEQRELTDEDIINFMMIPLCLETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGALYYPTAKLREMAKNGQKFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgagagcggcatcgtcgaattg
aatttcgacctcaagggtgagtccgttaacaagttcaaccgtctcactctgagcgagctg
cgccagtccgtggatgccattaaggccgacggttcgatcaagggcgtaatcgttaccagc
ggcaaagacgtgttcatcgtcggcgccgacatcaccgagttcgtcgataacttcaagttg
cccgacgaagagctggtagccggcaacctcgaagccaacaagatcttcagcgacttcgaa
gacctcaatgtgccgaccgtagtggccatcaacggcatcgccctgggtggcggtttcgaa
atgtgcctggccgctgactaccgcgttgctgcagagaccgccaaggtcggcctgcctgaa
gtcaaactgggtatctacccgggcttcggtggcaccgtgcgtctgccgcgcgtgatcggt
accgacaacgccatcgagtggatcgcttccagcaaggaagccaaagctgccgacgccctg
aaagtaggcgcggtcgacgctgtcgtcgctccggccaaactgcaggaagcggctctggac
ctggtcaagcgcgccatctccggcgagctggactacaaggccaagcgtcagcccaagctg
gaaaagatcaagctcaacgccattgagcagatgatgtccttcgaaaccgccaaaggtttc
gttgctggccaggccggcccgaactacccggctccggtcgaagccatcaagaccatccag
aaagctgccaacttcggtcgcgacaaagcgctggaagtggaagccgctggcttcgtcaag
ctggccaagacttcggttgcggaaagcctgatcggtctgttcctgaatgaccaggaactg
aagaagaaagccaagcagcacgacgaaatcgcgcgtgacgtgaaactggctgccgtactg
ggcgcgggcatcatgggtggcggtatcgcctaccagtccgcttccaagggcaccccgatc
ctgatgaaggatatccgcgaagagggtatccagatgggtctggccgaggcttccaagctg
ctcggcaatcgcgttgccaaaggccgcatgacgccagcgaagatggctgaagccctgacc
ggcattcgtccgaccatgtcctacggtgatttcggtaacgtcgacatcgtcgtcgaagcc
gtagtcgagaacccgaaggtcaagcagatcgttctggccgaagtggaaggtgtggttcgc
gaagacgcgatcctggcttccaacacttcgaccatttccatcaacttgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggttgaagtcatccgtggcgagaagtccagcgatgtagccgtggctactaccgttgcc
tacgccaagaagatgggcaagagcccgatcgtggtcaacgattgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggtggcttctccaagctgctggctttcggtgtcgac
ttcgtgcgtatcgacaaggtcatggagaagttcggctggcccatgggcccggcgtacctg
tccgacgtggtcggtatcgacactggccaccacggccgtgacgtgatggctgaaggcttc
ccggatcgcatggctgttgaaggccgtactgcggttgacgtgatgtatgaagcagatcgc
ctgggccagaagaacggcaaaggcttctactcctacgaaatggacaagcgcggcaagccg
aagaaggtttctgatccggttgcctacgacctgctcaagtccatcgtgaccgagcagcgt
gagctgactgacgaagacatcatcaatttcatgatgatcccgctgtgcctggaaaccgtt
cgttgcctggaagacggcatcgttgaaaccgctgccgaggccgatatgggcctgatctac
ggcatcggcttcccgcccttccgtggtggtgcactgcgttacatcgactccatcggtgta
gccgaattcgtggccctggctgacaaatatgccgacctgggcgcgctgtactacccgacc
gccaaacttcgcgaaatggccaaaaacggccagaagtttttcggttaa
DBGET
integrated database retrieval system