Pseudomonas campi: HNE05_18120
Help
Entry
HNE05_18120 CDS
T07561
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
pcam
Pseudomonas campi
Pathway
pcam02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcam00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HNE05_18120 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcam02044
]
HNE05_18120 (tssC)
Secretion system [BR:
pcam02044
]
Type VI secretion system
Imp/Vas secretion system core components
HNE05_18120 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
QKE65191
UniProt:
A0A6M8FD02
LinkDB
All DBs
Position
complement(27035..28510)
Genome browser
AA seq
491 aa
AA seq
DB search
MSTSAVVETTRNVAEAGILDRIIAETRLTPDDEAYDIAKRGVSAFIEELLKPHNQNEPVK
KAMVDRMIAEIDAKLSRQMDEILHHADFQALESSWRGLKLLVDRTNFRENTKLEILNASK
QDLLDDFEDSPEITQSGLYKHIYTAEYGQFGGQPVGAIVANYFFDPSSPDIKCMQHVASV
ACMAHAPFIAAAGPKFFGLESFTGLPNLKDLKDHFEGPQFAKWQSFREREDARYVGLTLP
RFLLRNPYDPEENPVKSFVYKENVAGDHEHYLWGNTAYTFASKLTDSFAKFRWCPNIIGP
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFIALTMRKGSDNAAFFSA
NSTQKPKFFGISEEGKTAELNYKLGTQLPYLFIVNRLAHYLKVLQREQIGAWKERTDLEL
ELNKWIRQFVADQENPSSEVRSRRPLRAAQVIVSDVDGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccagtgcagtagtggaaaccacccggaatgtcgccgaagccggcattctcgac
cgcatcatcgcggaaacccggctgaccccggacgacgaggcctacgacatcgccaagcgt
ggcgtgtcggcctttatcgaagagctgctgaagccgcacaaccagaacgagccggtgaag
aaggccatggtcgaccgcatgatcgcggagatcgacgccaagctcagccggcagatggac
gagatcctccaccacgccgacttccaggccctggaatcgtcctggcgcggcctcaagctg
ctggtcgatcgcaccaacttccgcgaaaacaccaagctggaaatcctcaacgcctccaag
caggacctgctggacgacttcgaggacagcccggaaatcacccagtccggcctgtacaag
cacatctacaccgccgagtacggccagttcggcggccagccggtcggcgctatcgtcgcc
aactacttcttcgaccccagctcgccggacatcaagtgcatgcagcacgtcgcctcggtg
gcctgcatggcccacgcgccgtttatcgccgctgccggcccgaagtttttcggcctggag
agtttcaccggcctgcccaacctgaaggacctcaaggatcacttcgagggcccgcagttc
gccaagtggcaaagcttccgcgagcgcgaagacgcccgctacgtcggcctgaccctgccg
cgcttcctgctgcgcaacccctacgatccggaagagaacccggtgaagagcttcgtctac
aaggaaaacgtcgccggcgaccacgagcactacctgtggggcaacaccgcctacaccttc
gcctccaagctgaccgacagcttcgccaagttccgctggtgcccgaacatcatcggcccg
cagagcggtggcgcggtggaagacctgccgctgcaccacttcgagagcatgggcgagatc
gagaccaagatccccaccgaagtgctggtctccgaccgccgcgagtatgagctggccgag
gaaggctttatcgccctgaccatgcgcaagggcagcgacaacgccgcgttcttctccgcc
aactccacccagaagccgaagttcttcggcatcagcgaggaaggcaagaccgccgaactg
aactacaagctcggcacccagctgccctacctgttcatcgtcaaccgcctggcgcactac
ctgaaagtgctgcagcgcgagcagatcggcgcgtggaaagagcgcaccgacctggagctg
gagctgaacaagtggatccgccagttcgtcgccgaccaggaaaaccccagctcggaagtc
cgtagccgccgcccgctgcgcgccgcgcaagtgatcgtcagcgacgtcgatggtgagccg
ggctggtaccgcgtcagcctcaacgtgcgtccgcacttcaagtacatgggtgccgatttc
accctgtccttggtcggcaagctggacaaggaataa
DBGET
integrated database retrieval system
