Pomacea canaliculata (golden apple snail): 112573164
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Entry
112573164 CDS
T05881
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112573164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112573164
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112573164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
DUF4201
RBD-FIP
HALZ
Motif
Other DBs
NCBI-GeneID:
112573164
NCBI-ProteinID:
XP_025109061
LinkDB
All DBs
Position
LG10:complement(12016724..12054141)
Genome browser
AA seq
2440 aa
AA seq
DB search
MAGKDLLETSLDADDLQSLSPSTREKLEGLISSLTLQRNEITAKYEKLRVNSEQQYFELE
KQHIDTSSQLEAERHGKEDLSNRLAELEKKYNETTNELKELSSKYEKIQVEQRELSSANQ
LLQAEKRDLASFMETRDKNIDRLKDEIKELSEALAKANKEKCDTQAELMKVQAEEVSQKY
REKRLQQEKEQLQQQVNWLSDQLSEKTKEFVTFRREKASRLMELQGQVEEKTEEITHHLA
TIEALKTSKEEQASKIESLIQKLKEARDLQTQSDEQFRQELAAQSKLYALYKDASEENNG
KITELTRAVEELQRLLKEASTAYSNLEIAKGEEESKLKDELREKDLKIESLDEELRNAND
LLAAKRAGVLKFTEDEMANLFPLAATTSKLLKKGMTLTEIYSSYVQAVENLEQQKEENER
LSSYLDQIVQEIEDKAPLLKKQREDYETALQTLDQLTPKLDSAMLECEKMRAECDDTKRR
SSFFQRENVRLQQQNADLSRQVRYLVKEIQEMKGGCVVQDDEAEVSSTQDSSSASRVITQ
HMVTFRNIEELQEKNQQLLEAIRDLSTQKEQEESLATDARVVELQKQLEEATKELDDLRS
ARSRQAEMVEAIVRQRDMYRVLLQQGSMSPISPSLPPLTSTPAQGALASPLLSQAPPLVS
VDTEKKLQEVQMALKELQAEYSTYRKEKLENEKILNEQLEKCRADLSETRMQNARLSSQL
DHSAERYKILQGNAEGYRKEIAALQDRCQKSSTTMAKLELTIIQLKEEVYEKQQAASTWE
AKVDHLHMQYDTLRSHEQRLVAELESMRREQQSQALLNASLQAIQNNLERAEFETKARYT
NQIDYMEKQVAMLQKKLEMAEDDKNNKVQALETKLASKQEELTKVLSGQEQLKVEAAKAK
DDMQAAMQELSATEAKLAAAENRLSSIGSLGEDEFKEELKDLKSSKEMLERRLKNMSEQL
KQAREQEKQYQVIAQSVEEKLRQSNQTSREFQEMCETRVLDAQNAKALLEKRVEELEEAH
QKQLNENIRLAEDSHNLNNELRKQLTSLRHELQETVQMREAAVVNLEAAQKACQEQTKLA
SEAEDKYQRELMLHAADMDALTALKKRLESYNDDLIKAQEAVKAEQNKLLDAQTSWQEQE
RILHAECQLLEARNVELEQQNKTLHAQMETLSKQAISLQEKAAEDPLNMSFSDENSKTNE
QLLEVIRFLRREKEIAETKLQVIESSSNRMKQTVESLERQLEEANVALSEERQHSQMNTQ
TMSEHAALMRRVENLNVLTDSNKLLREERDRLQAQNQELDVKVRKLEADISPLQAQLREL
TAQKEAVELEKDSLAGEVERWKSRTHHLVEQSNKTDPEEHRKLVVEKDQMRKQLAQTKEE
LFKVKAELSKVNATLSNRESELANLKQETTKLREEMQNVKQQLEDELKESEKKNVTATQL
RKIGRKYKDQWESTVKELEDLRKTAAGQQQSSSEHEQNEIRKMEQAHSETREKLVAVEQA
QKAAEERQAVVERERDEAKAKVTEMEKECDELKMKVAQCEAELNSQKMQLETVQQEMSQV
QGSRQGLEEEQKRLQSEHASLEEKHNQSRKVLANAKTRITQQKEQLDRITTEYNELKRKL
ADSGQISKEESDLRVASLKSQYDHRVSLLERDLEAQRAESDAAASAADLQQQVMQLQQER
DRLIVENTELSMKVQQLHRQVEMLPKTGQAQPTQPMPRQAPSSGTSPTPTEAPKMASIKP
VATAATTSTMQHSSSTQAKAMASIRPMAIAPANTSTSTTVPQHPSSSSTPPMAAVMPTTM
AQQEQNDDLPSTSGMQQQTTSSIPAASVTGRPQQQVQIVQPQMESTGDLLEESSVQAVVI
PNIQEPAPAQVLPQQQTQTQPGTTPSTTPPSAATPSTSVEMQPLPGSSSQLGKRSRDDGD
TSEEGDAKRSKVTQQEAAVIPTITITDENAKVVTHIEPQTQTLQESDRGQGISVTTSTTD
LGQAGCQETPQQIFEQQEDERVLCQVQEVQEGPVEEEQGGDGDVIVVGSDEEEVETNMQV
SATLEYEVGQDQEVEDESDEDADSEDEQIDEGGEFDEDQENDVDEEDDNDVVIIDIDENE
QQDSQIPVGQGETSTVTGAVSSPRPPPPLQPVPHTERLPSTSRSQLTPFLLGQGGPFDDD
DCTVPSTPTLSLPRRTDGFAEALNSPHVSQRFVFSGGVEVPVQPELAQLESQRALGMDDT
RMDLSQFDDAGGRSMSSTPTPLQMSAGAALEATAVTAAVTAAPAGQSQETSGITSSYPGL
FLGQGEGQPSAPESSEQQMDLTSESSQGQEDASATTTQASLAEGGMGDEEESKSTSRPRI
QRIVWEDSGSNSASSTTTQSSAPAPASTSGQQQQQQQQQSSQRPPASARSRGLRRGATPT
RARPPMVWRGGPRGGGQQQQHPPRGMGARHPSRGMYRGQF
NT seq
7323 nt
NT seq
+upstream
nt +downstream
nt
atggcggggaaagatttgctcgagacttctcttgacgcagatgatttacagtcattgtct
ccctccacacgagagaaattggagggtttaatatcatcgcttacattacaacggaacgag
attacggcaaaatatgaaaaacttcgagttaattcagaacaacaatactttgagttggag
aaacagcatatagatactagcagtcaactagaagcagaacgtcatggaaaagaagacctt
tcaaatcgtctggctgaacttgagaagaaatataatgaaaccacaaatgaacttaaggag
ctgtcttcaaaatatgagaagatacaagtggaacagagagagttgtccagtgccaaccag
cttctgcaggcagaaaagcgggatttggcaagttttatggaaacaagggataaaaacatt
gatcggttaaaagatgaaataaaagagctctcagaggctcttgctaaggcaaacaaggag
aagtgtgacacccaggctgagcttatgaaagtgcaagcagaagaagtctcacaaaagtac
cgagaaaaacgattgcagcaagagaaagagcagttgcaacagcaagtaaactggctgagt
gaccagctgagtgagaagaccaaagagtttgtcacattccggcgagagaaggctagccgt
ttaatggagctgcagggacaagtagaggaaaagacagaagagataacacatcaccttgca
actattgaggctttaaagacgtccaaagaagaacaagcttctaagattgaatcactcatc
cagaagttgaaggaggctcgagacttgcagacgcagtcagatgagcagttcagacaggaa
cttgcagcacagtctaaactttatgccctgtataaggacgcatcagaggaaaacaatggc
aagataacagagctgacacgagccgtggaagaactgcaaaggctgcttaaagaagcatct
acagcctattcaaatttagaaattgctaaaggtgaagaggaaagcaaactcaaagatgaa
cttagagaaaaagatttgaagattgaaagtctagatgaggagcttcgcaatgccaatgac
ttgctggcagccaaaagggctggtgtgctaaaattcacagaggatgaaatggcaaacttg
ttcccgttggctgccactaccagcaaactgcttaaaaagggcatgacactgacggagatt
tatagttcctacgtccaagcagtggaaaaccttgaacagcagaaagaagaaaatgaacgt
ctcagttcttaccttgatcagattgtacaagagattgaagacaaggcaccactgctgaag
aaacagcgtgaggactatgagacagccttgcagaccttagaccagctcacacccaaactg
gactcagcaatgctagaatgtgagaagatgagagcagaatgtgatgacacgaaaaggcgc
agtagcttcttccagagagaaaatgtccggcttcagcagcagaatgctgaccttagtaga
caggttcgctacctagtgaaggagatccaggagatgaaaggagggtgtgttgtgcaagat
gatgaggctgaagtgtcctcaacccaggattcttccagtgcttcgcgcgtcatcactcag
cacatggtcacctttaggaatattgaagagctccaggagaaaaaccagcagcttttggag
gcaatccgagatctcagcacccaaaaagagcaagaagagagtctggccacagatgccaga
gttgtggagctgcagaagcagctggaggaagccactaaagaactagatgacctgcgatca
gcacgctccagacaagctgaaatggtagaagccattgtgcgacagagggacatgtatcga
gtgctgctgcagcagggaagcatgtccccaatctctcccagtctgccacccctgacatcg
actccagcacaaggagcgctggccagccctcttctgtcacaagccccaccactggtcagt
gtggatactgaaaagaagttacaagaagtgcaaatggctttgaaggagttgcaggctgag
tacagcacctataggaaagagaaactggaaaatgagaagattctgaatgaacagcttgaa
aaatgtcgagcagatctgtcagaaacacgcatgcaaaatgctcggctttcatcacagctg
gaccactcagcagagcgatacaagattctgcaggggaatgctgagggttacagaaaagaa
atagcagcactccaagatcgatgccagaagagcagcacaaccatggccaaacttgagctg
acaatcatccaacttaaagaggaggtgtatgagaagcagcaggcagcaagtacttgggaa
gccaaggttgaccacttgcacatgcagtatgatacactgcggtcacacgagcagcggctt
gtagcagagctggaaagcatgcgacgagaacagcaatctcaggccctgctaaatgcaagc
ttacaggccattcagaacaacttggagcgtgcagagtttgagaccaaggctcggtacacc
aaccagattgattacatggagaagcaggtggccatgttgcagaaaaagctggagatggca
gaagacgacaagaacaacaaggtccaggccctggagacaaagctggcctcaaagcaagag
gagttaaccaaagtcctctcaggccaagaacagctgaaagtagaagctgccaaagccaag
gatgatatgcaggctgccatgcaggagctgtctgcaactgaagctaaactggcagcagca
gaaaacaggctgagcagcattggctcccttggtgaagatgagttcaaggaagagctaaaa
gatctcaaatccagcaaagagatgcttgaacggcggctaaagaacatgtctgagcaactg
aagcaagccagggagcaagagaagcagtaccaggttattgcacaaagtgtagaggagaaa
ctgcgacagagcaaccagacgagcagagaatttcaagagatgtgtgagacaagggttctg
gatgcacaaaatgcaaaggcattgttggagaaaagagtcgaggaattagaggaagctcat
cagaaacagttgaatgaaaatattcgtctggctgaggatagtcacaacttgaacaatgaa
ctgaggaaacaattgacctctttgcgacatgaactgcaagagactgtgcagatgagggaa
gcagctgttgtaaacctggaggcagcacaaaaagcttgtcaggaacagacaaaactggcc
tcagaggcagaagacaaataccagcgagaactgatgctgcacgctgctgacatggatgct
ctcacggccttaaagaaacggctggagagttacaatgatgatttaatcaaagctcaagaa
gcagtaaaggcagagcagaataagctgctggatgcccagacctcatggcaagagcaggaa
cgtattctccatgctgagtgtcaacttttagaagcacgcaatgtggaactagagcagcag
aacaagaccctgcatgcccagatggaaactctgagcaaacaagccattagtctgcaggaa
aaggctgctgaagacccacttaacatgtctttctcagacgaaaacagcaagaccaatgaa
cagctgctggaggtcatcagatttttgcggcgtgaaaaggagatagcagaaacaaagctc
caggtgattgaatcgtcctctaaccggatgaagcagactgtagagtccttggagcggcag
ttagaggaagctaatgtagcactcagtgaagagaggcagcattcacagatgaacacgcag
acaatgtcagagcatgcagcactcatgcgacgtgtggagaacttgaatgtgttgaccgac
agcaacaaactgttgagagaggaaagggacaggctgcaggctcagaaccaggagctggat
gtcaaggtgaggaagctcgaagccgacatcagtcctttgcaggcacagttgagagagtta
acagctcagaaagaggctgtagaactagagaaggactctctggctggtgaggtagaaaga
tggaagtctcgcacgcaccacttagtggaacagagcaacaagactgatccagaagagcac
cgaaaacttgtagttgagaaagatcagatgcgaaagcagcttgcccagaccaaggaggag
ctgtttaaagtgaaagctgagctgtctaaagtaaatgcaacattgagcaacagagaatca
gaactggcaaatcttaagcaagagacaacaaaactgagggaggagatgcaaaatgtaaag
caacagcttgaagatgaactcaaagaatcagagaagaaaaatgtcacagcaacccagttg
agaaagatagggcgcaagtataaagaccagtgggagagcacagtcaaagagttggaggat
ctccgaaagactgcagctgggcagcagcagagttcatccgaacatgagcagaatgaaatc
aggaagatggagcaagcccacagtgagaccagggaaaagttggttgctgtagagcaagct
cagaaggcagcagaagaacggcaggcagttgtggagcgggaacgagacgaggcaaaggcc
aaagtcacagagatggagaaagaatgtgatgaacttaagatgaaggtggcacagtgtgaa
gctgaactcaactctcagaagatgcagctggagacagtccagcaggagatgagccaagtg
caagggagtcgtcaagggctggaagaagagcagaaacggctgcaatcagagcatgcaagt
ctggaggagaaacacaaccagtcgcgtaaagttctggccaatgccaaaacacgtatcacc
cagcaaaaagagcagcttgatcgcatcacaactgagtacaatgaactcaagcgcaaactg
gcagactcaggacagatatctaaagaggagagtgatcttcgtgtggcatctctcaagtcc
cagtatgaccatcgagtctcactgctggagcgagacctagaggctcagcgagcagaatcc
gatgcggcagcttcagctgctgatctgcagcaacaggtgatgcagctgcagcaagaaaga
gaccggctgattgtagaaaacacagaactttccatgaaggtgcagcagcttcacagacaa
gtagaaatgctacccaagacaggccaggcacagcccacacaacccatgccacgccaggct
ccatcttctggcaccagccccacaccaacagaagcccccaaaatggcaagcatcaagcca
gtagccactgcggcaacaacttcgacgatgcagcattcttcatccacccaggcaaaggcc
atggccagcatcaggcccatggccattgccccagcaaacaccagcaccagcaccactgtc
cctcagcacccctcctcctcctcaactcctcccatggctgccgtcatgccaaccaccatg
gctcagcaggagcagaatgatgacctgcccagcacctctggcatgcaacagcagacaaca
tcatcaattcctgcagcttccgtcactggccgcccacagcagcaggtgcagattgtccaa
ccccagatggaaagcacaggtgaccttttagaggagtcatcagtccaggctgttgtcatt
ccaaacatccaagaaccagcacctgcacaagtgctgccccagcaacaaacacagacacaa
cctggcactacaccctccaccaccccacccagtgcagccaccccatccacctccgttgag
atgcagccgttgccagggagcagcagtcagcttggcaagcggtcacgggacgacggggac
acatcagaggaaggggatgctaaacgttcaaaagtaactcagcaggaagcagctgtcatt
cccaccatcaccataacagacgaaaatgccaaggttgtgacacacatagagcctcagaca
caaacactgcaagagagtgaccgaggacaaggtatatctgttactacctccaccacagac
ttgggacaggcaggatgccaagagacaccacagcagatttttgaacaacaggaggatgag
agggtcctgtgccaggtgcaagaggtgcaagagggtccagtggaagaagaacagggaggc
gatggtgatgtcatcgttgtaggaagtgacgaggaggaagtggaaaccaacatgcaggtg
tcagcaacactagagtatgaggtgggccaagatcaagaagtggaggacgagtccgatgaa
gatgctgactctgaagatgaacaaatagatgagggtggggagtttgatgaggatcaggaa
aatgatgttgatgaagaagatgataatgatgtggtcatcattgacattgatgaaaatgaa
caacaagactcccagatccctgtgggacagggggaaaccagtactgtcacaggcgctgtc
agcagtccccgtcctcctccaccattgcagccggtgccccacacagagcgactgccctca
actagcaggtcacagctaacccccttcttgcttggtcagggaggcccatttgatgatgat
gactgcactgtaccaagcacacccaccctgtccttaccacgacgaactgatggcttcgct
gaggcattaaattctccccatgtctctcagagatttgtgttttctggtggagtggaagta
cctgttcagccagaacttgcccagcttgaatctcagcgagctttaggtatggatgatact
cgcatggacttgtcacagtttgatgatgctgggggtcgcagcatgtcgtccaccccaacc
cctttgcagatgagtgcaggagctgcacttgaagcaactgcagtcacagctgcagtaact
gctgcaccagctggtcagtcccaagaaacttcaggtataacctccagctatcctggtttg
tttctaggacaaggtgaaggacagccttctgcaccagagtcatctgaacaacaaatggac
ttaacaagtgagagctcacaaggccaggaagatgcatctgctaccactactcaagcctcg
cttgctgaagggggaatgggagatgaagaggaatcaaagagcacaagtcggcccaggata
caacgcatcgtgtgggaggacagtggcagcaacagtgccagcagcactaccactcagtcc
tctgctccagcaccagcctccacatcagggcagcagcagcagcagcagcaacagcagtcc
agccagaggcctccagcatcagctcgttcacgcggcctgcgtcgaggtgccacgccaaca
agggcaaggccacccatggtatggaggggtggacctcggggtgggggacagcaacagcag
catccacctaggggcatgggagcacgacatcccagccgaggaatgtaccgaggacagttt
tag
DBGET
integrated database retrieval system
