Pseudomonas canavaninivorans: LOY40_13100
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Entry
LOY40_13100 CDS
T08625
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
KO
K11901
type VI secretion system protein ImpB
Organism
pcas
Pseudomonas canavaninivorans
Pathway
pcas02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LOY40_13100 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcas02044
]
LOY40_13100 (tssB)
Secretion system [BR:
pcas02044
]
Type VI secretion system
Imp/Vas secretion system core components
LOY40_13100 (tssB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
UVM75043
LinkDB
All DBs
Position
2893114..2893617
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AA seq
167 aa
AA seq
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MASYSFQNEVPKSRVNIKLDLHTGGAQKKVELPLKLMVMGDYSNGKEQRPLSERGKVNID
KHNVDNVLEEFSPRLAFAARNTLTGDGADMSVELSFQRMKDFEPEQVARQIPQLRALLAM
RNLLRDLKSNLLDNMTFRHELERILQDEALSDELRTELAALAPKEVR
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtacagttttcaaaatgaagtgcccaaaagcagggtcaatatcaaactcgat
ctacacaccgggggcgcacagaaaaaagttgaattgccgctgaagctgatggtgatgggg
gactacagtaacggcaaggagcagcgcccgttatcggagagggggaaggtcaatatcgat
aaacacaacgtcgacaacgtccttgaggaattctccccccgcctggcattcgctgcgcgc
aacacgctgacgggtgatggggcggatatgtcggttgaactgagttttcaacggatgaag
gattttgagccggagcaagtggcccgccagattccgcagttacgggcgctgttggccatg
cgcaacctgttacgcgaccttaagtcgaacctgctggacaacatgaccttccgtcacgaa
ttggagcgcatcctccaggatgaagccctcagtgatgaactccgaactgagctggcggca
ttggcgccaaaagaagtccgctaa
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integrated database retrieval system
