KEGG   Pseudomonas canavaninivorans: LOY40_13125
Entry
LOY40_13125       CDS       T08625                                 
Name
(GenBank) Hcp family type VI secretion system effector
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pcas  Pseudomonas canavaninivorans
Pathway
pcas02025  Biofilm formation - Pseudomonas aeruginosa
pcas03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcas00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LOY40_13125
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    LOY40_13125
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcas02044]
    LOY40_13125
Secretion system [BR:pcas02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LOY40_13125
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: UVM75048
LinkDB
Position
2898976..2899467
AA seq 163 aa
MAIPVYLWLQDDGGAEIKGSVDVQKREGSIEVIAQDHSLYIPTDNSTGKLTGARVHTPFL
FSKEIDASSPYLYKAVTTGQTLKSAEFKWYRIDDAGQEVEYFITKLENVKVVKVAPKMHD
VKDPTKEKHNHLEQIELRYEKVTWTYKDGNIIHSDSWSERQSA
NT seq 492 nt   +upstreamnt  +downstreamnt
atggcaattcccgtttacctctggctgcaagatgacggcggcgcagagatcaagggttcg
gtggatgtgcaaaagcgcgagggcagcattgaagtcatcgcccaggaccacagcctgtac
atcccgaccgacaacagcaccggcaagctgacgggcgcgcgggttcacacgccgttcctg
ttttccaaggaaatcgacgcttccagtccctacctctacaaggccgtgaccaccggccag
accctcaagagcgccgagttcaagtggtaccgcatcgatgatgccgggcaggaagtcgag
tatttcatcaccaagctggagaacgtcaaggtggtgaaagtcgcgccaaaaatgcacgac
gtcaaggacccgaccaaggagaagcacaaccacctggaacagattgagttgcgctacgag
aaggtcacctggacctacaaggacggcaacatcatccattccgattcctggagcgagcgc
caaagcgcctga

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