Parolsenella catena: Pcatena_08820
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Entry
Pcatena_08820 CDS
T05797
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pcat
Parolsenella catena
Brite
KEGG Orthology (KO) [BR:
pcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcat03016
]
Pcatena_08820 (rnd)
Enzymes [BR:
pcat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Pcatena_08820 (rnd)
Transfer RNA biogenesis [BR:
pcat03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Pcatena_08820 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
BBH50295
UniProt:
A0A3G9KAQ8
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All DBs
Position
complement(965883..967016)
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AA seq
377 aa
AA seq
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MFISTYEELERFCERASSSPVLAVDTEFLRERTYRPRLCLIQLATSADDIAAVDPIAIRD
LSPIARLFEDPSIVKILHACSQDLEVIDGAMGCVPSPMFDTQLAAAFLGHRMQLGYGALV
ESYTGVHLAKAESLTDWSRRPLDPEQLVYAEDDVRYLPGIYEQMRSELVDRDRLSMVLPE
MQALLDPSHYRHDPMLAYQHLKRVSSLTRRQLAVAREACGWRERLAAKRDIPRKWVLSDE
VLVEVCRRAPADEQRLRRIRGTEQLSERDSAALLHAISRGLSCPASNYPSVPRRSRPSGE
QESVVDLMYAMLRIISERSGVATQLIATRDELLDFMSGEEGASLSQGWRYELAGRQLEGL
LSGSCGLTVKDGRVEIL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
ttgttcatctcaacgtatgaggagctcgagcgcttctgcgagcgcgcgtcctccagtccg
gtgcttgccgtcgataccgagttccttcgcgagcgcacgtatcgccccaggctctgcctc
atccagctcgcgacctcggcagacgacatcgcggcggttgaccccatcgccatccgtgac
ctctcgcccatcgcgaggctgttcgaggacccatcgatcgtcaagatcctgcatgcctgc
tcgcaggacctcgaggtcattgacggcgccatgggctgcgttccttccccgatgtttgat
acccagctcgccgccgccttccttggccacaggatgcagctgggatatggcgcgctcgtg
gagtcctacacgggcgtccaccttgccaaggccgagagccttacggactggtctcgccgc
ccgcttgaccccgagcagctcgtgtatgccgaggatgacgtccgctaccttcctggaatc
tacgagcagatgcgctccgagcttgtggatcgcgaccgcctctccatggtgcttccggag
atgcaggcgcttcttgatccatcgcactatcgccatgacccgatgcttgcctaccagcat
ctcaagcgcgtgagctcgctcaccaggcgtcagctcgcggtggctcgcgaggcgtgcggc
tggcgagagaggcttgcggccaagcgagacatcccgcgcaagtgggtcctgtccgacgag
gtcctcgtcgaggtctgtcgtcgcgcgcccgcagacgagcaaaggctccgtaggattcgc
ggcaccgagcagctctccgagagggactcggccgcccttctccacgccatctcccgtggg
ctctcctgtcctgcgtccaactacccgagcgtgccgaggcgctcgcgcccgtcgggcgag
caggagagcgtcgttgacctcatgtacgctatgctgcgcatcatctccgagcgctccggc
gtggccactcagctcatcgccacgcgagacgagctgcttgacttcatgtctggcgaggag
ggagcctcgctatcccagggctggaggtatgagctcgccgggcgccagctcgagggcctc
ctgtccggttcctgtggcctcacggtgaaggacgggcgcgtcgagattctctag
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