Pseudomonas cavernae: D3880_14245
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Entry
D3880_14245 CDS
T08208
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pcav
Pseudomonas cavernae
Pathway
pcav00071
Fatty acid degradation
pcav00280
Valine, leucine and isoleucine degradation
pcav00310
Lysine degradation
pcav00362
Benzoate degradation
pcav00380
Tryptophan metabolism
pcav00410
beta-Alanine metabolism
pcav00640
Propanoate metabolism
pcav00650
Butanoate metabolism
pcav00907
Pinene, camphor and geraniol degradation
pcav00930
Caprolactam degradation
pcav01100
Metabolic pathways
pcav01110
Biosynthesis of secondary metabolites
pcav01120
Microbial metabolism in diverse environments
pcav01200
Carbon metabolism
pcav01212
Fatty acid metabolism
Module
pcav_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
D3880_14245 (fadB)
00650 Butanoate metabolism
D3880_14245 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
D3880_14245 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
D3880_14245 (fadB)
00310 Lysine degradation
D3880_14245 (fadB)
00380 Tryptophan metabolism
D3880_14245 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
D3880_14245 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
D3880_14245 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
D3880_14245 (fadB)
00930 Caprolactam degradation
D3880_14245 (fadB)
Enzymes [BR:
pcav01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
D3880_14245 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
D3880_14245 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
D3880_14245 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
D3880_14245 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
SDH_sah
Motif
Other DBs
NCBI-ProteinID:
AYC33446
UniProt:
A0A385Z2Y8
LinkDB
All DBs
Position
complement(3126724..3128871)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLADLRQSVDAIKADGSIKGVIVTS
GKDVFIVGADISEFTENFKLSDEELVAGNLEANKIFSDFEDLNVPTVVAINGIALGGGFE
MCLAADYRVMAERAVIGLPEVKLGIYPGFGGTVRLPRVIGTDNAIEWIASGKENKAADAL
KLGAVDAVVTADKLKEAALDLVKRAISGELDYRAKRQPKLEKIKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEATGFVKLAKTSVAESLIGLFLNDQEL
KKKAKHHDEIARDVTLAAVLGAGIMGGGIAYQSASKGTPILMKDIREEGIQMGLNEASKL
LGKRVEKGRMTPAKMAEALNAIRPTMSYGDFGNVDLVVEAVVENPKVKQAVLAEVEGVVG
ENTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFSKLLSFGVDFMRIDKVMEKFGWPMGPAYL
SDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQKNGKGFYSYEVDKRGKP
KKVSDPVAYDLLKSIVVEQRELSDEDIINYMMIPLCLETVRCLEDGIVETAAEADMGLIY
GIGFPLFRGGALRYIDSIGVAEFVALADQYAELGALYYPTAKLREMAKNGQKFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgagagtggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaaattcaaccgtctgaccctggccgatctg
cgccagtcggtagacgccatcaaggccgacggttcgatcaagggcgtgattgtcaccagt
ggcaaagacgtgttcatcgtcggcgccgatatcagtgaattcactgaaaatttcaagctg
tcggatgaagagctggtggcgggtaacctcgaagccaacaagatcttcagcgacttcgaa
gacctcaatgttccgaccgtagtcgccatcaacggcatcgccctcggtggcggtttcgag
atgtgtctggctgcggattaccgcgtcatggccgagcgcgctgtgatcggtctgcctgaa
gtcaaactgggcatctatcccggtttcggcggcaccgtgcgcctgccgcgcgtgatcggt
accgacaacgccatcgagtggatcgcctccggcaaggaaaacaaggctgccgacgcgttg
aaactcggcgccgtggatgccgtggttactgccgacaagctcaaagaagccgcgctggac
ctggtcaagcgtgccatctccggcgagctggactacagggccaagcgtcagccgaaactg
gagaagatcaagctcaacgccatcgagcagatgatggccttcgaaaccgccaagggtttc
gtcgcgggccaggccggtccgaactatccggccccggtcgaagctatcaagaccatccag
aaagccgccaatttcggccgcgacaaggccctggaagtggaggccactggcttcgtcaaa
ctggccaagacctcggttgccgaaagcctgatcggtctgttcctcaacgaccaggagctg
aagaagaaggccaagcaccacgacgaaatcgcccgtgacgtgacactggccgccgtactg
ggcgccggcatcatgggtggcggtatcgcctaccagtccgcctccaaaggcacgccgatc
ctgatgaaggatatccgcgaagagggtatccagatgggcctgaacgaagcctccaagctg
ctcggcaagcgcgtcgagaaaggccgcatgaccccggcgaagatggccgaagccctcaac
gccattcgcccgaccatgtcctacggtgatttcggcaacgtcgacctcgtcgtcgaagcc
gtggtcgagaatccgaaggtcaagcaagcagtgctggctgaagtggaaggcgtggtgggt
gagaacaccatcctcgcatccaacacttcgaccatttccatcagcctgctggccaaagcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggttgaagttattcgcggcgagaagtccagcgatgtggccgtggccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtactgttcccgtacttcggcggtttctccaagttgctgtccttcggtgtcgac
ttcatgcgcatcgacaaggtgatggagaagttcggctggcccatgggcccggcctatctg
tctgacgtggtcggcatcgacaccggccaccatggtcgcgacgtaatggcggaaggtttc
ccggatcgtatggccgtggaaggcaagacggccgtcgacgtgatgtacgaagccaatcgc
ctgggccagaagaacggcaaaggcttctactcctatgaagtagacaagcgcggcaagccg
aagaaagtctccgatccggttgcctacgatctgctgaaatcgatcgttgtcgagcagcgc
gagctgagcgacgaagacatcatcaactacatgatgatcccgctgtgcctggaaactgtt
cgttgcctggaagacggcatcgtcgaaaccgctgccgaggccgatatgggtctgatctac
ggtatcggcttcccgctcttccgcggtggtgcactgcgttacatcgactccatcggtgta
gccgaattcgtagccctggccgaccaatatgccgagctgggtgcgctgtactacccgacc
gccaagcttcgcgaaatggccaaaaacggccagaagtttttcggttaa
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