Pseudomonas carboxydohydrogena: AFIC_001950
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Entry
AFIC_001950 CDS
T08963
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
pcax
Pseudomonas carboxydohydrogena
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcax03009
]
AFIC_001950
Enzymes [BR:
pcax01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
AFIC_001950
Ribosome biogenesis [BR:
pcax03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
AFIC_001950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_31
FtsJ
Ubie_methyltran
Methyltransf_25
MTS
Methyltransf_5
PrmA
PCMT
Cons_hypoth95
Methyltr_RsmF_N
Methyltransf_15
Methyltransf_24
Motif
Other DBs
NCBI-ProteinID:
WEF50412
LinkDB
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Position
complement(2018084..2019388)
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AA seq
434 aa
AA seq
DB search
MTPAARLSAAIEVLEAIDTDRSPAQTALKAWGTAHRFAGSGDRAAIAGLVFDALRRRSSA
TYVMDEDSPRGRLLGALRLERGFETDAIAALCNGERFAPAPLSDAERAALNSRTLDDAPP
AIAGDYPEWLDPHLAEAFGDDRVKEAAAMASRAPLDLRVNTLRSKPEKALAALSHLGAQP
TPWSPLGLRIVLGADARNPGVHAEEVFIKGGVEVQDEGSQLAALFTQAKPGEQVIDLCAG
AGGKTLALAAMMGGKGRLIATDRDKRQLAPIHERLSRAGIHNADIRAPKRAENPLSDING
TADLVVVDAPCTGTGTWRRNPDAKWRMRPGALEVRLKDQAEVLERAASLVKPGGRIAYIT
CSVLPQENGGQIDAFTARHGDFAVVPPAEVIGVLGERAVAFGKAVRQSPQGLLMTPLRTG
TDGFFVSILRKADH
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccgccgcacggctgtccgctgccattgaagttctcgaagccatcgacaccgac
cgctccccggcgcagaccgcgctgaaggcgtggggcaccgcgcaccgtttcgcgggttcg
ggcgaccgcgccgcgatcgcggggctggtgttcgacgcgctgcgccgccgttcctcggct
acgtatgtgatggacgaggacagcccacgcgggcggctgctcggcgcgttgcggctggag
cgcggctttgagaccgacgccatcgcggcactgtgcaacggcgagcgtttcgcgcccgcg
ccgctgtcggatgccgagcgcgccgccctgaattcacgcacgctcgacgatgcaccaccc
gccatcgcgggcgactatcccgaatggctcgacccgcatctggcggaagccttcggcgac
gatcgcgtgaaggaggcggcggcgatggcgagccgcgcgccgctcgacctgcgcgtcaat
acgctgcgctcaaaacccgagaaggcgctggccgccctgtcgcatctgggagcgcaaccc
acgccatggtcgccgctcgggttgcgcatcgtgctcggggcggatgcgcgcaatcccggc
gttcacgccgaggaggttttcatcaagggcggcgttgaagttcaggatgaaggatcgcag
cttgcggccttgttcacacaggcaaaaccgggcgaacaggtgatcgacctgtgcgcgggc
gcgggcggcaagacgctggcgctcgcggcgatgatgggcggcaagggccgcctgatcgcg
acggatcgcgacaagcgccagcttgcgccgatccatgagcggctgtcgcgcgcgggaatt
cataacgccgatattcgtgcgcccaagagggccgagaacccgctctccgacatcaatggg
accgccgacctcgtggtggtggatgccccctgtaccggcaccgggacgtggcggcgcaac
ccggacgccaagtggcggatgcggcctggcgcgctggaggttcggctcaaggatcaggcc
gaggtgctggagcgggcggcctcattggtgaagccgggcgggcgcatcgcctacatcacc
tgttccgtcttgccgcaggagaacggcggccagatcgacgcctttaccgcccgccacggg
gacttcgccgtggtcccgcctgccgaggtcatcggggtgcttggggagcgcgccgtcgct
tttggaaaagccgtgcgccagtccccgcaggggctgctgatgaccccgctgcgcaccggg
acggacgggtttttcgtctccatcctgcgcaaggcagatcactaa
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