Pseudomonas carboxydohydrogena: AFIC_002688
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Entry
AFIC_002688 CDS
T08963
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pcax
Pseudomonas carboxydohydrogena
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcax03009
]
AFIC_002688
Enzymes [BR:
pcax01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
AFIC_002688
Ribosome biogenesis [BR:
pcax03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AFIC_002688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
WEF53138
LinkDB
All DBs
Position
2780962..2781960
Genome browser
AA seq
332 aa
AA seq
DB search
MTAPAAGKSPGQSPGQSQRLDRVLAEQVEDLSRTRLKALIVAGHVSIGGAPILDPAYQVK
ADETIIIEVPPAVPPEPEGENIPLDIVYEDDDLLVLNKPKGLVVHPAAGHETGTLVNALI
AHCGASLSGIGGVKRPGIVHRLDKDTTGLMVVAKNDRAHQSLTAQFADHGRTGALRRGYM
AFVWGAPSRPHGTIDQPIDRHPFAREKMAVRQGGRHAITHWEMLESFEGADGKPLAALLA
CQLETGRTHQIRVHLGHIGHPLIGDDVYGSGFRTKANHLGGAARTVVAALGRQALHAYLL
QIEHPATGEIMNWQSGLPEDLVLLQSALRAAA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atcacagctcccgccgcaggcaaatcgccaggccagtcgccaggccagtctcaacggctc
gaccgcgtgctcgccgaacaggtcgaggacctgtcacgcacccggctgaaagccctgatc
gtggccggccatgtcagcatcggcggcgctccgatccttgatcccgcctatcaggtcaag
gcggacgagacgatcatcatcgaggttccgcccgccgtccccccggagccggaaggcgag
aacatcccgctcgacatcgtctacgaggacgacgatctcctcgtgctcaacaagccgaag
gggctcgtggtgcatccggcggcggggcacgagaccggcacgctggtcaacgcgctcatt
gcccattgcggcgcaagcctttccggcatcggcggggtgaaacgccccggcatcgtgcac
cggctcgacaaggacaccaccgggctgatggtggttgccaagaacgaccgcgctcatcaa
tcgctcacggcgcagttcgccgaccatggccgcaccggcgcgctgcggcgcggctacatg
gcgttcgtctggggcgcaccctcacggccgcacgggaccatcgaccagccgatcgaccgc
catcccttcgcacgggagaaaatggcggtgcggcaaggcggccggcacgccatcacccat
tgggagatgctggagagtttcgagggagcggacggcaaaccgctcgccgccctgctcgcc
tgccagctcgagaccgggcggacccaccagatccgcgtccacctcggccatatcggacat
cccctgatcggcgacgacgtctatggctcgggcttccgcaccaaggccaaccatctgggc
ggagccgccagaactgtggtggcggctctcggcaggcaggcccttcatgcctacctcctc
cagatcgaacatccggcgacaggagaaataatgaactggcaatcggggctgccggaggat
ttggttctcttgcagagcgccctgcgcgcggcggcttga
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