Pseudomonas chengduensis: QYM18_08050
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Entry
QYM18_08050 CDS
T09586
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
KO
K11901
type VI secretion system protein ImpB
Organism
pche
Pseudomonas chengduensis
Pathway
pche02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pche00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
QYM18_08050 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pche02044
]
QYM18_08050 (tssB)
Secretion system [BR:
pche02044
]
Type VI secretion system
Imp/Vas secretion system core components
QYM18_08050 (tssB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
WKC39030
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All DBs
Position
1709646..1710152
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AA seq
168 aa
AA seq
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MAKEGSVAPKERINVTFKPATGGAQEEIELPLKLMVLGDFTQRADDRKIEDRKPISIDKN
SFDEVLAKQELNLTFAVPNRLQDEQEGDELAVQLKINSMKDFNPANLVDQVPELKKLMEL
RDALVALKGPLGNAPAFRKAIESVLSDDDSRDRVLGELGLAAQGKLDS
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaaggctcggtagcccccaaggaacgcatcaacgtcactttcaaacccgcc
accggcggtgcccaggaagaaatcgaactgcccctgaaactcatggtgctcggcgatttc
acccagcgtgccgacgatcgcaagatcgaagaccgcaagcccatcagcatcgataagaac
agcttcgacgaagtgctggccaagcaggaactgaacctgaccttcgccgtaccgaatcgt
ctgcaggacgagcaggaaggcgacgagctggccgtacagctgaagatcaactccatgaag
gacttcaacccggccaacctggtcgaccaggtgccggaactgaagaaactgatggagctg
cgcgacgctctggtcgccctgaagggcccgctgggcaacgccccggccttccgcaaagcc
atcgagagcgtgctctctgacgacgactcgcgcgaccgcgtgctcggcgaactgggcctg
gccgcccaaggcaagctcgattcctga
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