Pseudomonas chengduensis: QYM18_17790
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Entry
QYM18_17790 CDS
T09586
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pche
Pseudomonas chengduensis
Pathway
pche02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pche00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QYM18_17790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pche03021
]
QYM18_17790
Transcription machinery [BR:
pche03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QYM18_17790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
Rv2175c_wHTH
HTH_24
HTH_29
HTH_IclR
MerR
Sigma70_r3
HTH_31
TnsD
HTH_17
HTH_AsnC-type
GerE
HTH_5
HTH_10
HTH_3
FaeA
HTH_28
HTH_11
Fe_dep_repress
Phage_terminase
HTH_38
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
WKC36297
LinkDB
All DBs
Position
complement(3814352..3814870)
Genome browser
AA seq
172 aa
AA seq
DB search
MSVQDSSNQQLVGLLYRDHRDWLFGWLRKSLNCAQRAEDLSQDTFVRLLGRADLHSPREP
RALLTTIAKGLLVDQFRRHALERAYLEELALAPQAVQPSPEEQALALEQLAEIDRLLGQL
SSKARAAFLYNRLDGLGHAEIAERLGVSPSRVRQYLAQGMRQCYIALYGAPQ
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggttcaggattccagcaatcagcagctggtcggtctgctttatcgcgatcaccgt
gactggctgttcggctggctgcgcaaaagcctgaactgcgcgcagcgcgccgaagacctg
agtcaggacaccttcgttcgcctgctcggtcgcgccgacctgcacagcccgcgcgagccc
agagccctgctcaccaccatcgccaaggggctgctggtagaccagtttcgccgccatgcg
ctggaacgtgcctatctggaagagctcgcgctggctccgcaagccgtgcaacccagcccg
gaagaacaggccctggccctggagcaactggccgagatcgatcgcctgctcggtcagctg
tcgagcaaggcacgcgcagctttcctctataaccgtctggatggcctcggtcatgccgag
atcgccgagcgccttggcgtctcgccgtcgcgcgtgcgtcaatacctcgcccagggaatg
cgccagtgctacatcgcgctgtacggagcgccgcaatga
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integrated database retrieval system