Pseudomonas chengduensis: QYM18_22685
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Entry
QYM18_22685 CDS
T09586
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pche
Pseudomonas chengduensis
Pathway
pche02020
Two-component system
pche02025
Biofilm formation - Pseudomonas aeruginosa
pche02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pche00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QYM18_22685
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
QYM18_22685
09142 Cell motility
02040 Flagellar assembly
QYM18_22685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pche03000
]
QYM18_22685
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pche02035
]
QYM18_22685
Transcription factors [BR:
pche03000
]
Prokaryotic type
Helix-turn-helix
Other families
QYM18_22685
Bacterial motility proteins [BR:
pche02035
]
Flagellar system
Flagellar assembly proteins
Others
QYM18_22685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA
AAA_7
AAA_22
nSTAND3
AAA_2
bpMoxR
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WKC37222
LinkDB
All DBs
Position
complement(4854874..4856349)
Genome browser
AA seq
491 aa
AA seq
DB search
MWRETKILLIDDNAARRHELAIILSFLGEEHLACTSQDWRNAVAELASSREVLSVLLGDV
EAKGGALELTKQIAGWDEFLPLLTVGDSSIVEWPEDLRRRVLASLETPLSYNKLLDSLHR
AQVYREMYDQARDRGRQREPNLFRSLVGTSRAIQQVRQMMQQVADTEASVLILGESGTGK
EVVARNLHYHSKRREAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQTADVRIIAATHKNLEKMIEDGSFR
EDLYYRLNVFPIEMAPLRERIEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHDWAG
NVRELANLVERMAIMHPYGVIGVGELPKKFRHVDDEDEQLAASLRDEMEERAAIMAGLPG
LDTPAMLPPEGLDLKDYLGNLEQGLIQQALDDAGGVVARAAERLRIRRTTLVEKMRKYGM
SRREEDGQDED
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaaaatcctgttgatcgatgacaatgctgcgcgccgccacgagttg
gcgatcattctgagttttctcggggaagagcatctggcctgtaccagccaggattggcgc
aatgctgtggccgagctcgcttccagtcgcgaagtgctcagtgtcttgctgggcgatgtc
gaggccaagggtggggcgctcgagctgaccaagcagattgctggctgggatgagttcctg
ccgctattgacggttggcgactccagcatcgtcgagtggccggaagatttgcgcaggcgt
gtgctggccagcctggaaaccccactcagctataacaagctgctcgattcgctgcaccgt
gcccaggtctatcgcgagatgtacgaccaggcccgtgatcgtggtcggcagcgcgagccc
aatctgttccgcagcctggtcggtaccagtcgtgccattcagcaggtgcggcagatgatg
cagcaggtcgccgataccgaggccagtgtgttgatcctcggtgagtccggaaccggcaag
gaagtggtagcgcgcaatctgcattaccactccaagcgtcgcgaggcaccattcgtgccg
gtcaactgcggtgccattccggccgagttgctggaaagcgagttgttcggtcacgagaag
ggcgccttcaccggagccatcaccagtcgggcagggcgcttcgagctggccaacggcggt
acgctgtttctcgatgaaatcggcgacatgccgctgccgatgcaggtcaagttgctgcgc
gtgctgcaggagcgaaccttcgagcgtgtcggcagcaacaagacgcagaccgccgatgtg
cgcatcatcgccgccacgcacaagaacctggagaagatgatcgaggacggcagtttccgt
gaggacctgtattaccgcctcaacgtcttcccgatcgagatggcgccgctgcgcgagcgt
atcgaagatatcccgttgctgatgaacgagctgatttcgcgcatggagcacgagaagcgt
ggctccattcgcttcaactcggccgccatcatgtcgctgtgccgtcatgactgggcgggc
aacgtacgtgagttggccaacctggtagagcgcatggcgatcatgcatccctacggggtg
atcggggtgggcgaattgccgaagaagttccgtcatgtcgatgatgaggatgagcaactc
gcggccagcctgcgtgatgaaatggaagagcgcgctgcgatcatggccggtttaccgggc
cttgatacgccagccatgctgccgccggaggggctggatctgaaagactacctcggtaat
ctggagcagggccttatccagcaggcgctggacgatgcgggcggtgtggtggcgcgtgcg
gctgagcgcctgcgtattcgccgtaccacgctggtcgagaagatgcgcaagtacggcatg
agccgccgtgaagaggatggtcaggacgaggattga
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