Pochonia chlamydosporia: VFPPC_09175
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Entry
VFPPC_09175 CDS
T09407
Name
(RefSeq) RNA polymerase Rpb7-like domain-containing protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03020
RNA polymerase
pchm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VFPPC_09175
09124 Replication and repair
03420 Nucleotide excision repair
VFPPC_09175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_09175
03019 Messenger RNA biogenesis [BR:
pchm03019
]
VFPPC_09175
03400 DNA repair and recombination proteins [BR:
pchm03400
]
VFPPC_09175
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
VFPPC_09175
Messenger RNA biogenesis [BR:
pchm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
VFPPC_09175
DNA repair and recombination proteins [BR:
pchm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
VFPPC_09175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
28851752
NCBI-ProteinID:
XP_018140894
UniProt:
A0A179FCT6
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Position
6:complement(1261697..1262394)
Genome browser
AA seq
171 aa
AA seq
DB search
MFFLYNMERRVTLHPSYFGRNMHELVTSKLLKDVEGTCAGSYYIISIMDTFDISEGRILP
GNGLAEFTVGYRAVVWRPFKGETVDAVVYSINPQGFFAQAGPLRLFVSAHLIPSEIKWDP
NATPPQFTNNEDTVIEPGTHVRVKIIGTRTEVGEMWAIGSIKEDYLGCLQD
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcctctacaatatggaacgcagggtgaccctgcatccatcctactttggccgc
aacatgcacgaacttgtcaccagcaagctgctaaaggatgtcgagggcacttgcgctgga
agctactacatcatttccatcatggacacgttcgatatatccgaagggcgcatccttcct
ggcaacggcttggcagaattcaccgtcggctaccgtgctgtcgtctggcgaccattcaag
ggcgagacggtcgatgccgttgtgtattccatcaaccctcaaggtttcttcgcgcaggct
ggcccactgcgactattcgtttcggcacatctaataccaagcgaaattaagtgggatccc
aatgccacaccgcctcaatttaccaataacgaagacacggtcattgagcccgggacgcac
gtgcgcgtcaagatcattggaacaagaacagaagttggcgaaatgtgggccattggaagc
atcaaggaagattacttgggctgccttcaagactaa
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integrated database retrieval system