KEGG   Pochonia chlamydosporia: VFPPC_09175
Entry
VFPPC_09175       CDS       T09407                                 
Name
(RefSeq) RNA polymerase Rpb7-like domain-containing protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
pchm  Pochonia chlamydosporia
Pathway
pchm03020  RNA polymerase
pchm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    VFPPC_09175
  09124 Replication and repair
   03420 Nucleotide excision repair
    VFPPC_09175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pchm03021]
    VFPPC_09175
   03019 Messenger RNA biogenesis [BR:pchm03019]
    VFPPC_09175
   03400 DNA repair and recombination proteins [BR:pchm03400]
    VFPPC_09175
Transcription machinery [BR:pchm03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     VFPPC_09175
Messenger RNA biogenesis [BR:pchm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     VFPPC_09175
DNA repair and recombination proteins [BR:pchm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      VFPPC_09175
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 28851752
NCBI-ProteinID: XP_018140894
UniProt: A0A179FCT6
LinkDB
Position
6:complement(1261697..1262394)
AA seq 171 aa
MFFLYNMERRVTLHPSYFGRNMHELVTSKLLKDVEGTCAGSYYIISIMDTFDISEGRILP
GNGLAEFTVGYRAVVWRPFKGETVDAVVYSINPQGFFAQAGPLRLFVSAHLIPSEIKWDP
NATPPQFTNNEDTVIEPGTHVRVKIIGTRTEVGEMWAIGSIKEDYLGCLQD
NT seq 516 nt   +upstreamnt  +downstreamnt
atgttcttcctctacaatatggaacgcagggtgaccctgcatccatcctactttggccgc
aacatgcacgaacttgtcaccagcaagctgctaaaggatgtcgagggcacttgcgctgga
agctactacatcatttccatcatggacacgttcgatatatccgaagggcgcatccttcct
ggcaacggcttggcagaattcaccgtcggctaccgtgctgtcgtctggcgaccattcaag
ggcgagacggtcgatgccgttgtgtattccatcaaccctcaaggtttcttcgcgcaggct
ggcccactgcgactattcgtttcggcacatctaataccaagcgaaattaagtgggatccc
aatgccacaccgcctcaatttaccaataacgaagacacggtcattgagcccgggacgcac
gtgcgcgtcaagatcattggaacaagaacagaagttggcgaaatgtgggccattggaagc
atcaaggaagattacttgggctgccttcaagactaa

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