Pseudomonas chlororaphis subsp. piscium: C4K32_6180
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Entry
C4K32_6180 CDS
T09060
Name
(GenBank) Uncharacterized protein ImpC
KO
K11900
type VI secretion system protein ImpC
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
C4K32_6180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pchp02044
]
C4K32_6180
Secretion system [BR:
pchp02044
]
Type VI secretion system
Imp/Vas secretion system core components
C4K32_6180
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GFIT
Motif
Pfam:
VipB
VipB_2
SurA_N_3
Motif
Other DBs
NCBI-ProteinID:
AZC72797
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Position
complement(6749416..6750891)
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AA seq
491 aa
AA seq
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MSTSAAQQKSNENGEYSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNDGEPVK
KAMVDRMIAEIDAKLSRQMDEILHHEDFQSLESAWRGLQLLVDRTNFRENIKIEILNVSK
QDLLDDFEDSPEVMQAGLYKHIYTAEYGQFGGQPVGAIIANYFMSPSSPDVKLMQYVSSV
ACMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYIGLTVP
RFLLRNPYDPEENPVKSFVYKETVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGP
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSA
SSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAAQIIVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagtgcagcacaacagaaaagcaacgagaacggcgagtacagcattctcgac
agcatcatcgccgaaacccgcctgactccggacgacgaagcctacgacatcgccaagcgc
ggcgtgtcggccttcatcgaagagctgctcaagcctcagaacgatggcgagccggtcaag
aaggccatggttgaccgcatgatcgccgagatcgatgccaagctcagccgccagatggac
gaaatccttcaccacgaagacttccagtccctggagtcggcctggcgtggcctgcagttg
ctggtcgaccgcaccaacttccgcgaaaacatcaagatcgaaatcctcaacgtctccaag
caggacctgctggacgacttcgaagattcgccggaagtgatgcaggctggcctgtacaag
cacatctacaccgctgaatacggccagttcggtggccagccggtgggcgcgatcatcgcc
aactacttcatgtcgccaagctcgccagacgtgaagctgatgcagtacgtgtccagcgtt
gcctgcatgtcccacgcgccgttcatcgccgcggccggtccgaagttcttcggcctggaa
agcttcaccggcctgccggacctgaaggatctgaaagaccacttcgaaggtccgcaattc
gccaaatggcagagcttccgccagtcggaagactcgcgctacatcggcctgaccgtaccg
cgcttcctgctgcgcaacccgtacgatccggaagagaacccggtcaaatccttcgtctac
aaggaaaccgttgccaacagccacgaacactacctgtggggcaacaccgcgtacgcgttc
ggtaccaaactgaccgacagcttcgccaagttccgctggtgcccgaacatcatcggcccg
cagagcggtggcgcggtagaagacctgccgttgcaccacttcgaaagcatgggcgaaatc
gaaaccaagattcctacagaggttctggtttccgaccgccgtgaatacgaactggccgag
gaaggcttcatctccctgaccatgcgcaaaggcagcgacaacgcggcgttcttctccgcc
agctcggtgcagaagccgaagttcttcggcatcagcgcggaaggcaaggctgcggagctg
aactacaagctcggtacccagctgccgtacatgatgatcgtcaaccgcctggctcactac
ctgaaagtgctgcagcgcgagcaactcggttcgtggaaagaacgtaccgacctcgagctg
gaactcaacaagtggatccgccagtacgtcgccgaccaggaaaacccgagcgccgaagtt
cgtggccgccgtccgctgcgcgccgcgcagatcatcgtcagcgatgtggaaggtgagccg
ggctggtaccgcgtcagcctgaacgtgcgcccgcacttcaagtacatgggtgccgatttc
accctgtcgctggttggcaagctggacaaagagtaa
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