Pontibacillus chungwhensis: QNI29_16235
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Entry
QNI29_16235 CDS
T09116
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pchu
Pontibacillus chungwhensis
Brite
KEGG Orthology (KO) [BR:
pchu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pchu03016
]
QNI29_16235 (thpR)
Enzymes [BR:
pchu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
QNI29_16235 (thpR)
Transfer RNA biogenesis [BR:
pchu03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
QNI29_16235 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
WIF97272
LinkDB
All DBs
Position
complement(3128243..3128800)
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AA seq
185 aa
AA seq
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MAETHYFIGISLSVPAQQTLAQLQNNLSQDVSYKQWTNPKDLHITLTFLGGVKPGKVEEI
QQRMRKVARSHSPFPILLKGIGTFGKENQPRVLWVGAEKTNSLTALHREVQDQCAEAGFK
KDNRSYTPHITLAKKWNNPQKFLSSIPEAMIGEEEFVHSFSLFRIHPDQQPKYERVEHFK
LGEEA
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtggctgagacccattattttatagggatttctttatcagtccctgctcaacagacatta
gctcaactacaaaataatttgtcgcaagatgtctcatataagcagtggacaaacccgaaa
gaccttcatattacattgacttttttaggtggagtaaagccagggaaagtagaagaaata
caacaaagaatgaggaaagtcgctagatctcattctccattccccatcctattaaaagga
atcggaacctttgggaaagagaatcaacctagagtgttatgggttggggctgaaaaaaca
aactctcttacagccctacatcgagaagtgcaggatcagtgtgcggaagcgggttttaaa
aaggacaatcgttcctacaccccgcatattaccttagctaagaaatggaataatcctcaa
aaatttctctcatctattccagaagcaatgattggtgaggaagagtttgttcattccttt
tctttgtttcgtattcacccggatcagcaaccaaagtatgaaagagttgaacactttaaa
ttaggagaggaggcataa
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