Pseudomonas cichorii: PCH70_32020
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Entry
PCH70_32020 CDS
T03002
Name
(GenBank) exopolysaccharide biosynthesis protein
KO
K20998
polysaccharide biosynthesis protein PslE
Organism
pci
Pseudomonas cichorii
Pathway
pci02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PCH70_32020
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GNVR
Wzz
TPR_MLP1_2
DUF4201
Motif
Other DBs
NCBI-ProteinID:
AHF68355
LinkDB
All DBs
Position
3839901..3841892
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AA seq
663 aa
AA seq
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MINIRSFRDLLRLFFIFKREVKITVMVTFVIVILGAFLLPNRYESTALLLVKPGRDTSTV
PIELSDRQAIVVPNGLRDPLLDEERMLTGRPIMRMVAEKYLNELSKIEPETGVMASVKNG
IKYVVRSIFEAGHSVLQFLGLAEKRTPVERMAEDLEKNFKVRHEQGSSVMELTFTWNDPV
TAQIVLKTWIDEYQLQRTKTLGRVSLYGFYETEVKAIGANIISYKQQIQGYLNQLGAVSI
SQRLADTSQGLNDLRTERNNTIRAIASTKAGLDTLKTQLAAQPKTVSAGRELALNPNRQD
LQNRINGKEVERQELLRSFKEQAPPVRAANEEINNLKQLLKEQDATIQRSESITPNPIYN
RMQNVYADQQTSYARLQTQLAQQNAQLAQLESDRQLALKLEPELSRLQNELDAAQKSYAL
YTDSLEKARIDRELDNSQISNIATIEDATFNASRVFPKSLLMLLLAFPLSVVVGFLALYF
FYLLDQRIHDGDKIEGRFGVPVWTSLPDLERAQDRSAALTANLHRIYGILPLGQVAQKGL
AIGFTSVHRGEGVNFVISRLSTLLTEQGHSVRTEGRGPAKPGEIVLINASGVYGNQEAFV
LLRDADQIVLVVRAEQTTVPMLEDALTTLNTAFKKVDGVILNRRRFEVPEHVLKFLKRIG
SRA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatatccgttcatttcgcgatctgctacgcctgttttttatcttcaagcgcgaa
gtaaagatcaccgtgatggtgaccttcgtcatcgtcattctgggcgcgttcctgctgccc
aaccgttatgagtccaccgcgctgttgctggtcaagcccggtcgtgacaccagcaccgtg
cccatcgagctgtcagaccgccaggcgatcgtggtgcccaacggccttcgtgacccgttg
ctggacgaagagcgcatgctcaccggtcgcccgatcatgcgtatggtggccgagaagtac
ctgaacgagctgtccaagatcgagcctgaaaccggcgtcatggcttcggtgaaaaacggc
atcaagtacgtcgtgcgctcgatcttcgaggcgggtcacagcgtgctgcaattcctggga
cttgcggaaaagcgcacgccggtcgagcgcatggccgaagacctggagaagaacttcaag
gtccgtcacgaacagggctcatcggtgatggagctgaccttcacctggaatgacccggtg
accgcgcagatcgtgctcaagacctggatcgatgaataccagttgcaacgcaccaagacc
ctgggacgcgtcagcctgtacggattctacgaaaccgaagtcaaggcgattggcgccaac
atcatttcgtacaaacaacagatccagggctatctgaaccagttgggtgcagtgagcatt
tcccagcgcctggccgatacatcccagggcctcaatgacctgcgtaccgaacgcaacaac
accatccgcgccatcgcctccaccaaggccggactcgacacgctgaagacacagctggcc
gcgcaacccaagaccgtctcggcaggccgtgagctggcgttgaaccccaaccgccaggac
ctgcaaaaccgtatcaacggcaaggaagtcgagcgtcaggaactgctgcgctcgttcaag
gaacaggcgccaccggtgcgtgccgccaacgaggaaatcaacaacctcaagcaactgctc
aaggaacaggacgcaaccatccagcgctccgaaagcatcacgccaaaccctatctataac
cgcatgcagaacgtgtatgccgatcagcagaccagctacgcccgcctgcaaacccaactg
gcacagcagaacgcgcaactggcccaactggaaagcgaccgtcagttggcactgaaactg
gagcctgagctttcgcgcttgcagaacgagctggatgccgcccagaaaagctacgcgctc
tacaccgacagcctggaaaaggcgcgcatcgaccgcgaactggataacagccagatcagc
aacatcgccaccatcgaagacgctacgttcaacgccagccgggtcttcccgaaaagtctg
ttgatgctgctgctggccttcccgttgagcgttgtcgtgggtttcctggcgttgtacttc
ttctacttgctggatcagcgcatccacgatggcgacaagatcgaaggacgttttggcgta
ccggtctggaccagccttccggatctggaacgtgcccaggatcgcagtgcagccctgacg
gccaacctgcaccggatctacggcatcctgcctctgggtcaggttgcgcaaaaaggcctg
gccatcggttttacctccgtgcataggggcgaaggggtgaactttgtcatctcgcgcctg
agtacgctgctgaccgaacaaggccatagcgtacgcactgaaggccgtgggccggccaaa
ccgggagagatcgtgttgatcaatgcttcgggtgtttacggcaaccaggaggcttttgtc
ctgctgcgagatgccgatcagatcgtgttggtggtgcgtgccgagcagaccaccgtgccg
atgctcgaagatgccctgaccaccctgaacactgcgttcaagaaggtcgacggcgtgatc
ctcaaccgtcgccgctttgaagtaccggagcacgtcctgaagttcctgaagcgcatcggg
agccgtgcctga
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