KEGG   Proteus terrae subsp. cibarius: F9282_01200
Entry
F9282_01200       CDS       T06330                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
pcib  Proteus terrae subsp. cibarius
Pathway
pcib02024  Quorum sensing
pcib03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pcib00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    F9282_01200 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    F9282_01200 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcib03019]
    F9282_01200 (hfq)
   03036 Chromosome and associated proteins [BR:pcib03036]
    F9282_01200 (hfq)
Messenger RNA biogenesis [BR:pcib03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     F9282_01200 (hfq)
Chromosome and associated proteins [BR:pcib03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    F9282_01200 (hfq)
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: QGW01684
LinkDB
Position
232955..233242
AA seq 95 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNTGTNQTGTGYNGGAAQQDDVAE
NT seq 288 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttgcaagatcctttcctgaacgcattacgtcgtgaaagggtt
cccgtttctatctatttggtaaacggcattaaattgcagggtcagatcgaatcttttgac
caatttgttattttgctgaaaaacacagtaagtcagatggtatacaaacatgctatctct
accgtggtaccttcgcgtcctgtttctcatcatagcaacacaggcacgaaccaaactggt
acaggctacaatggtggcgctgctcagcaggatgatgttgcagaataa

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