Proteus terrae subsp. cibarius: F9282_08970
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Entry
F9282_08970 CDS
T06330
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pcib
Proteus terrae subsp. cibarius
Brite
KEGG Orthology (KO) [BR:
pcib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcib03016
]
F9282_08970
Enzymes [BR:
pcib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
F9282_08970
Transfer RNA biogenesis [BR:
pcib03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
F9282_08970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
ODP
Motif
Other DBs
NCBI-ProteinID:
QGW03109
LinkDB
All DBs
Position
complement(1852842..1854788)
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AA seq
648 aa
AA seq
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MFQDNPLLAQLKQQLHAQTPRVEGLVKGTDKGFGFLEVDGQKSYFIPPPQMKKVMHGDRV
IAAVHTNGDKESVEPEELVEPFLTRFVGRIQKKEGDNRLWIIPDHPLLKDAIPCRPAQGL
THSFVDQDWAVAVMRRHPLNKGDKGFQAEITDYITDKDDHFAPWWVTLMRHQLERDAPEM
GNEALTLHDTLPREDLTSLSFVTIDSASTEDMDDALFIRKEENGQLTLFIAIADPTAYIL
PNSELDKVAAQRALTNYLPGFNIPMLPRELSDNICSLRPNEKRPALVCQVSINEDGALLE
DIHFYSAWVESKAKLVYDNISDWLEGENSQWQPENEMVHEQVMLLKEMCEKRHEWREKHA
LVFKERPDYRFILDEGGNVLDIVAEKRRIANRIVEEAMITANICAAKVLAKNLGFGVYNV
HTGFDPVYIDQVVQTLKDNGIETTSESLLTLEGFCQLRRELDNQPNQFVDSRIRRFQNFA
EIKAEPGPHFGLGLEAYATWTSPIRKYSDILNHRLLKAIISKESAEKPQEEDGIRIAERR
RANRMAERDVGDWLYARFLKPFAGTETLFNAEIIDITRGGVRVRLVENGAVAFIPAPFLH
AVRDEIQCSQETGTVIVKGETAYKLNDVIPVHIEDVKLETRNIVARPI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagacaatccgctgcttgcacagctaaaacagcaactccatgcccagacaccg
cgcgtggaaggccttgtaaagggaacagataaaggctttggcttccttgaagttgatggt
cagaaaagctattttatcccccctccacaaatgaaaaaagtgatgcacggcgaccgagtt
attgctgcagttcatacaaacggcgataaagagtcagttgaacctgaagaattagtcgag
ccgttcttaacacgttttgtcggccgtattcagaaaaaagaaggtgataaccgtctgtgg
ataattccagaccaccctcttttaaaagacgctattccctgccgtcctgctcaaggatta
acacatagctttgttgatcaagattgggccgttgctgtaatgcgtcgtcaccctcttaat
aaaggtgataaaggttttcaggcagaaataaccgactatatcacggataaagatgatcac
tttgctccttggtgggtgaccttaatgcgtcatcaacttgaacgtgatgcgcctgaaatg
ggtaacgaagcgctgacattacatgacactttgcctcgtgaagacctaacttctctctcc
tttgtcactattgatagtgcatcaacagaagatatggatgacgcgctctttattcgtaaa
gaagagaatggtcaattaacgctatttatcgcaatcgccgatccaacagcttatattctg
ccaaatagtgaattagataaagttgcggcacaacgtgccctgactaattatctaccaggc
tttaatatcccaatgttgcctcgtgagctgtcagataacatttgctcattacgccctaat
gaaaaacgccctgcattagtttgccaagtcagcatcaatgaagatggtgctctgcttgaa
gatattcacttttactctgcatgggtagaatcaaaagctaagctggtttatgacaatatt
tcagattggttagaaggtgaaaattcacaatggcaacctgaaaatgaaatggttcatgag
caagtaatgttattgaaagagatgtgtgaaaaacgtcatgaatggcgtgaaaagcatgct
ctggtctttaaagaacgccctgattaccgttttattcttgatgaaggcggcaatgtttta
gatatcgtggcagaaaaacgccgtatcgcaaaccgcattgttgaagaagcaatgatcacc
gccaatatctgtgcagcaaaagtactagcgaaaaacttaggttttggcgtttacaatgtt
catacaggctttgatcccgtctatatcgatcaagtcgtacagaccttaaaagataacggt
attgaaacgacatctgaaagtttgttaacacttgaaggtttctgccaattgcgtcgtgaa
cttgataatcagccaaatcaattcgttgatagccgtattcgtcgcttccagaactttgct
gaaatcaaagctgagccaggccctcactttggattggggttagaagcttatgcgacatgg
acttcaccaattcgtaaatacagtgatattttaaatcaccgtttactcaaagcgattatc
agcaaagaaagcgctgaaaaaccgcaagaagaagatggcattcgtattgcagagcgtcgc
cgtgctaaccgtatggctgaacgtgatgtgggcgattggttatatgctcgtttcttaaaa
ccttttgctggcactgaaacactatttaatgcagaaattatcgatattactcgtggtggt
gttcgtgttcgcctagttgaaaatggtgctgtcgcttttattcctgcaccattcttacat
gccgtacgtgatgaaatccaatgtagccaagagacaggcaccgttattgtgaaaggcgaa
accgcatataaactcaacgatgtcattcctgttcatattgaagatgtaaaactagaaact
cgtaatatcgtcgctcgtcctatctaa
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