Pedobacter cryoconitis: AY601_3709
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Entry
AY601_3709 CDS
T04341
Name
(GenBank) hypothetical protein
KO
K21469
serine-type D-Ala-D-Ala carboxypeptidase [EC:
3.4.16.4
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm00550
Peptidoglycan biosynthesis
pcm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AY601_3709
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcm01002
]
AY601_3709
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcm01011
]
AY601_3709
Enzymes [BR:
pcm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AY601_3709
Peptidases and inhibitors [BR:
pcm01002
]
Serine peptidases
Family S12: D-Ala-D-Ala carboxypeptidase B family
AY601_3709
Peptidoglycan biosynthesis and degradation proteins [BR:
pcm01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
AY601_3709
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
AMQ00571
UniProt:
A0A127VHC7
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All DBs
Position
4389062..4390879
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AA seq
605 aa
AA seq
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MYKNNLVQTITVCLLAISTFSACAQDHQRNEDLLKVNTNILQHTVLLNNQQNIIPLTSLE
KKNIASVSLGFTFQNTSDSLLNKYAKVTPFSSAKYDNLPELLKLEDDLKFFNTIIISIQD
LETTKPKYINFINALAKTKSVIIALYGQQTNLVPFDSLSAPIVWAQDKSIQSAALIPQII
FGGIAAGNKLPRNISGKYLAGSGFTTTVTRLRYTVPEDAGVNSDNLREIDRITAEAIAAR
AAPGMVVLVAKDGKVIFNKAYGTHTYGGPADKVTDIFDLASITKITATTPMVMRLVEQNK
LKLDTNIGAYIALARPTAMNEIPVREVMLHQAGFIPYIAFHDGVKATDHSPDSSAAYPTK
VADGYFIRKDYFKDVMWPQMLNAPIRTRGKYVYSDISMYVMKDIVEQISGEPLNVYTAEN
FYAPLGMQTAGFLPRNRFSRDQIIPTEDDTYFRKTLLVGYVHDQGAALVGGVSGHAGLFA
STNDMAIMYQMFLNKGTYGGQTYFKPGTVETFTAQQSNVSRRGLGFDRWDPNLSKKYPSS
TASSQTYGHTGYTGTAVWVDPSRGLVYVFLSNRVNPSVTNKLVSMGIRSRIQDVINQAID
KGMDK
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaaacaatcttgttcaaactatcaccgtttgtcttcttgcgatatcaaccttc
agtgcctgtgcacaagatcatcaaagaaatgaagacctgctgaaagtcaacaccaacatc
cttcagcataccgttttactgaataaccagcagaatattattcccttaacgtccttagag
aagaaaaacatagcctcagttagtctgggttttacttttcagaatacttcggacagtttg
ctgaataaatatgcgaaagttacccctttcagctccgcaaaatatgacaacttacccgaa
ctcctaaagctcgaggacgacctgaaattcttcaataccattatcatttccattcaggat
ctcgaaacaacgaagccgaaatatatcaatttcatcaacgcactcgccaaaaccaaatcc
gttatcattgccctttacggtcagcaaaccaacctggttccctttgactccctgagtgcc
cctatagtctgggctcaggacaaaagcatacaatcagccgcactcatcccacaaataatt
ttcggaggaatagctgcaggcaacaaactaccccggaacatctcagggaaataccttgca
ggatcgggctttaccactaccgttacccgcttacgttatactgttcccgaagatgctggt
gtcaacagtgataacctgcgggaaattgatagaattacagccgaagcgattgccgcgaga
gccgcaccaggcatggtcgtattagtcgcaaaagacggtaaagtaatctttaataaagct
tacggaacccacacctatggtggtcccgcagataaagtcaccgatatatttgacctcgct
tccatcactaaaataacagcgaccacgcctatggtcatgcgtttggtagagcaaaacaaa
ttaaaactagataccaatattggtgcatacattgccttggcaagaccaaccgcaatgaac
gaaattccggtgcgcgaagtcatgctgcaccaggcaggtttcatcccttacatcgccttc
cacgacggcgttaaagcaaccgaccatagtccggactcatccgcagcttaccctacaaaa
gttgctgacggatatttcatcagaaaagactacttcaaagacgtcatgtggcctcaaatg
ctgaatgccccaatcagaaccaggggtaaatacgtatacagcgacatcagtatgtatgtg
atgaaagatatcgtggagcaaatcagcggagagcctctaaacgtctatacagccgaaaac
ttttatgcgccccttggaatgcaaactgccggattcctgccaagaaacagattcagcaga
gatcagattatccctacagaggacgatacctatttcagaaaaacattactggtaggttac
gttcatgatcagggagcagctttagtcggtggtgtttcaggacatgcaggcctctttgcc
agcaccaatgatatggccattatgtaccagatgtttctgaataaagggacctacggtggc
cagacctatttcaagccgggcacagtagaaaccttcaccgctcaacaatccaacgtgagc
agaagaggactgggatttgaccgctgggacccaaatctctctaagaaatacccctcttca
acagcctcctcacaaacctatggccacactggttataccggcacagcagtctgggtggac
ccatcaagaggcctggtttacgtatttttatctaaccgtgttaacccatcagtcaccaat
aagctggtcagcatgggtatccgttcccggatccaggacgtcattaatcaggcaatcgac
aaaggaatggataaataa
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